f27106a638335e7df641311766ed253fd7b1ceb4
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Commits
| Author | SHA1 | Message | Date | |
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 ducoterra
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eebc824636 |
phase: 162_search_recall_small_sources
**Phase 162 — final verification pass (all tasks already complete; verified + docs pass)** - Verified: `_fold` (NFKD+casefold, stdlib) inside `_normalize_name` — `BESTÅ`→`besta` question side, `BÅsta.md`→`basta` path side; A2 match classes/ranking/caps/bonus untouched; FTS/cosine/A8 untouched. - Verified: `grep_document` folds both sides via the imported `_fold` (no second copy); regex-teaching lines byte-identical; 3 copy sites updated. - Verified: `regenerate_overview` appends the deterministic `Sources: <name> (<k> doc|docs)` tail (happy path only; zero-doc + `LLMError` rows byte-identical; `build_overview_prompt`/`load_kb_overview`/`build_kb_section` untouched). - Verified: `TOOLS_SECTION` grep sentence updated + D4 search-discipline sentence present **verbatim**, immediately after the grep sentence; `PERSONA`/LOW pins byte-identical (`test_prompt_lock.py`). - Measured evidence (in `.agents/reports/162_…/task04_prefix_evidence_and_battery.md` + re-measured every run by `test_under_rank_is_measured_not_assumed`): pre-fix tokens `['build','best']` → IKEA doc rank 6 (outside top-5); post-fix `['build','besta']` → suggested #1, cosine unchanged 0.382. - `uv run pytest tests/e2e/test_search_recall_small_sources.py -v --no-cov` → **7 passed** (isolated); neighbours `test_kb_overview{,_freshness} test_name_signal_read_chips test_grep_regex_teaching test_harness_aligned_tools test_agent_document_tools test_tool_call_compact` → **24 passed**. - `uv run pytest --cov=app --cov-report=term-missing` → **3756 passed**, app coverage **99%** (>90%). - `uv run ruff check .` → All checks passed; `uv run pyright` → **0 errors**. - Completion criteria: fold both ways ✅ · `Sources:` tail ✅ · TOOLS_SECTION + D4 verbatim + re-cut pins ✅ · E2E green/battery recorded/full suite/coverage/lint ✅ · docs pass ✅ · commit + dir move = harness. - Battery: 5 phase-119 questions byte-identical to the phase-119 record (GATE PASS); the 2 Besta questions **skipped loudly** — verified the 2026-09-05 replica dump has zero `ikea` matches (`grep -c -i ikea data/bor_live_kb_replica.dump.sql` = 0); rank gate stays with the owner's live KB. - Docs fixed: README — overview-tail doc + `BOR_KB_OVERVIEW_MAX_CHARS` tail-cut constraint, the phase-162 search-discipline paragraph, per-phase (not per-story) E2E wording, new "Retrieval regression battery" section; AGENTS.md — rule 4 per-phase wording + battery command in Quick reference. (The overview's expected "AGENTS.md §6 tool table" does not exist in this repo — the grep contract line lives in README's tool table, already updated.) - Deviations (recorded, not assumed): `_fold` adds `casefold` (required for the pinned `ß → ss`); `①` NFKD-decomposes to `1` (the overview's parenthetical was wrong) and is excluded by `NAME_TOKEN_MIN_LEN`; pre-fix evidence lives in the reports dir because task files are read-only for this pass. - Owner follow-up A6 (runtime, not code): add the Tuning-tab steering note "IKEA's BESTÅ assembly PDF is a live source — search it as `BESTÅ` or `AA-1272068`". - Next pending phase: none — 162 is the only entry in `todo/` (harness moves it to `complete/`). |
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ducoterra
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1a657ce4ca |
phase: 138_markdown_blockquotes
**Phase 138 final verification pass — all green, no defects found.** - Verified: blockquote pass in `frontend/assets/markdown.js` (step 2b, between escape+inline and paragraphs), guard extended to `|blockquote`, docstring updated; `.md-quote` CSS (left border + padding + `--ink-soft`, no fill, palette vars only, contrast comments, user-bubble override); unit pins + node behavior; dedicated E2E (chat / viewer / restore); mock `QUOTE_TRIGGER`/`QUOTE_ANSWER`; fixture `tests/fixtures/quote_docs/`. Thinking block confirmed on the same shared renderer (app.js L2025/L3095). - `uv run pytest tests/e2e/test_markdown_blockquotes.py -v --no-cov` → 3 passed (isolation) - `uv run pytest --cov=app --cov-report=term-missing` → 3268 passed, 9 skipped; TOTAL **99%** (>90%) - `uv run ruff check . && uv run pyright` → All checks passed; 0 errors - Criteria: quotes render in chat/viewer/restore ✅ (E2E) + thinking ✅ (shared renderer + unscoped AA CSS); `>>` collapses, fence/table `>` untouched ✅ (unit+e2e); non-quote byte-identical ✅ (exact fixture; phase-44/renderer suites pass **unedited**, confirmed by empty `git diff --stat`) - No deviations; commit + phase-dir move left to the harness per pipeline rules (working tree clean of stray changes — only phase-138 diffs present) - Next pending phase: **139_read_range_tool_lines** |
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ducoterra
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a5b63f83ad |
phase: 119_name_signal_read_chips
All verification complete. Final report: **Phase 119 final verification pass — all criteria verified, one stale pin fixed.** - Verified implementation of all 6 tasks: D1 component name-hit rule (`name_hit` flag, titles never matched, retired length tie-break), D2 `BOR_NAME_HIT_BONUS` (0.005 default, 0 = byte-identical kill switch, negative fails startup, selection-layer only, `eval_retrieval` `suggested:` line), D3 suggested-folder lines (after `SUGGEST_INTRO`, before first block), D4 cite-discipline `SUGGEST_INTRO` sentence (PERSONA/LOW/`TOOLS_SECTION` byte-pins intact), D5 `done.sources` = read docs only (frontend no-op on empty confirmed), D6 mock `repeat your folder map` echo + new suite + telemetry. - Battery (replica restored per skill, fingerprint docs=1000/chunks=8866 verified, `eval_retrieval --from-file tests/fixtures/retrieval_battery.txt` re-run): **GATE PASS** — gitea README #4 in suggested top-5, forgejo 5/5 (README #1), gateway README in top-5 (#4), qwen3.8-27b quadlets top-5, Mongolia HIGH/fts=5 unchanged. - New E2E in isolation: `4 passed` ×2 (deterministic). All 27 modified E2E suites in isolation: 26 green; **1 stale pin fixed** — `test_source_chip_quality.py` durable-record order pin pre-dated the D1 re-rank (`aliases` stem sub-component name-hits `ssh_aliases.txt`, deterministically lifting `backups.md` over `kubernetes.md`; probe-verified 0.016277 vs 0.016036, 4/4 stable) — re-pinned with the phase-119 rationale; suite green ×2. - Gates: `uv run pytest --cov=app --cov-report=term-missing` → **2547 passed, app coverage 99%** (>90%); `uv run ruff check .` → All checks passed; `uv run pyright` → 0 errors. - Completion criteria: 1 ✅ (battery, recorded), 2 ✅ (folder lines; block/LOW byte-identical pins green), 3 ✅ (read-only chips, zero-read chips nothing, related row + durable record untouched — unit+E2E agree), 4 ✅ (all green), 5 → commit/phase-move left to the harness per pass rules (nothing committed). - Deviations: battery output + real-model telemetry recorded in `.agents/reports/119_name_signal_read_chips/task06_battery_and_e2e.md` and `TOOL_CALLING_TESTING.md` §11 (task files in `complete/` are immutable to this pass); gateway canonical doc at #4 vs overview's #3 was already documented at task 06 (containment gate met). - Next pending phase: **none** — `todo/` holds only phase 119. |
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ducoterra
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9820c361b0 |
phase: 118_summary_seed_context
**Phase 118 final verification pass — complete.** All criteria verified; 4 pre-existing defects found and fixed.
- **Verified:** summary-seed wiring (`select_suggested` top-5 no-floor → summary blocks, no full text in HIGH prompt), all-doc markdown summaries + NULL backfill (`summary_backfilled`, no `sources_meta` bump), `read` adds full text with `read_docs`-only dedupe, `done.sources` = suggested+read / durable record = suggested+related+read + `suggested=N` log line (seen live in E2E), byte-locked PERSONA/LOW/TOOLS_SECTION, battery gate PASS recorded in `TOOL_CALLING_TESTING.md` §10 (turbo 2026-09-16: 1/2/4 GREEN, cond-3 reported 9/10 per A7, contract 21/21, caps 0).
- **Defects fixed (all pre-existing, none phase-118):** ① `ChatMessage` schema missing the phase-113 `related` key → `extra="forbid"` 422'd every done-time auto-save of grounded turns with a related tier, leaving `message_count=1` (root cause of `test_share_chat` 3F; browser-level instrumentation proved the PUT 422) — added the field + unit/integration pins; ② `test_theme_semantic_completion` pins stale vs phase-117 debox (border/chip removed) — re-targeted to assert border/chip *absence*; ③ `test_header_consistency` `<26`px pin red on 26.125px native date-input line — bound relaxed to `<34` (wrap-detection intent kept); ④ `test_navbar_refresh` bor.chat.v1 key set updated for `related`.
- **Test/lint/coverage:** `uv run pytest --cov=app --cov-report=term-missing` → **2506 passed, app/ 99%** (>90%); `uv run ruff check . && uv run pyright` → clean, 0 errors.
- **E2E:** new story suite in isolation → **2 passed**; full 103-suite matrix sweep (each isolated) → **all 103 green** after the fixes; `test_share_chat` 4 passed, `test_theme_semantic_completion` 8 passed, `test_header_consistency` 3 passed, `test_navbar_refresh` 7 passed.
- **Deviations:** none from LOCKED decisions. Note: orphaned diagnostic uvicorn processes briefly made E2E sessions exercise stale code — killed and re-verified; a sweep-regenerated tracked screenshot was restored. No commits made (harness commits).
- **Completion criteria:** all 7 ✅ (commit/phase-move is the harness's step).
- **Next pending phase:** none — `todo/` holds only this phase's overview pending the harness move.
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ducoterra
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3b2dea5685 |
phase: 102_extensionless_filenames
All verification complete — every gate green, no defects found in previously completed work. **Phase 102 final verification pass — report** Verified (all three task files present in `complete/`; working-tree implementation matches D1–D5 design): - `match_extension` choke point in `app/rag/importer.py` (walk + `formats` counter), `doc_format` name-token badge in `app/api/docs.py`, config/`.env.example` docs, fixture `tests/fixtures/extensionless_kb/`, integration + E2E suites — all present and correct - Completion criteria: end-to-end sync (✓ integration + E2E), case matrix incl. `mydockerfile`/`Dockerfile.dev`/`.dockerfile` exclusions (✓ unit), `formats=dockerfile:1` not `unknown` (✓ log-line assertion), badge `dockerfile`/`containerfile` + `text` fallback + suffixed unchanged (✓ unit/integration/E2E), prune-on-token-removal (✓ `pruned==2`), suffixed-path rule byte-identical (✓ single-line swap, existing cases untouched) Test / lint results (exact commands): - `uv run pytest --cov=app --cov-report=term-missing` → 2084 passed, **99%** coverage (>90% gate) - `uv run pytest tests/e2e/test_extensionless_import.py -v --no-cov` → 2 passed, isolated, DB up - Regressions isolated: `test_import_documents` 3✓, `test_import_extensions_env` 2✓, `test_quadlet_jinja_import` 4✓, `test_document_viewer` 7✓, `test_kb_tree` 8✓ - `uv run ruff check .` → clean; `uv run pyright` → 0 errors, 0 warnings Notable: commit intentionally not made (harness commits the phase); 102's task files already sit in `complete/`, overview stays in `todo/` for the harness. Next pending phases: 98, 99, 103, 104, 105 (numeric next after 102: `103_suggestions_session_openers`). |
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ducoterra
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d4943b4822 |
phase: 94_ls_tree_drilldown
All green. Verification complete. **Phase 94 — `ls` drill-down tree: final verification pass (all 5 tasks were already complete; verified, nothing to fix)** - Verified `ls` 3-level tree (`app/rag/agent.py`): `ls()` sources + summaries, `ls(source)`/`ls(source/folder)` drill-down, 50-line file cap + grep-pointer note, NOT-A-FOLDER teaching refusal - Verified `folder_summaries` (migration 0017, model, `app/rag/folder_summaries.py` generator: `FOLDER_SUMMARY_MODE` marker, fail-soft per folder, ≥2-doc scope + prune) wired change-gated in both sync paths - Verified 10-turn fixture battery verdict recorded in `TOOL_CALLING_TESTING.md` §9 (2026-09-11): turbo PASS 19/19 contract, 98.7 s (−12.5…−13.2 % vs baseline); lite PASS 18/18, 43.6 s (+7.7 %) — accuracy at/above baseline, gate met - `uv run pytest --cov=app --cov-report=term-missing` → 1939 passed, 0 failed; TOTAL coverage **99 %** (folder_summaries.py 100 %) - `uv run ruff check .` → clean; `uv run pyright` → 0 errors, 0 warnings - E2E in isolation: `test_ls_tree_drilldown.py` 3 passed; `test_agent_document_tools` 4, `test_agent_unlimited_tools` 4, `test_harness_aligned_tools` 3, `test_search_tool` 3, `test_grep_regex_teaching` 2, `test_response_to_docs` 4 — all passed (read/grep contracts untouched) - Dedicated folder-summary tests (fail-soft, prune, both sync paths, migration): 46 passed - Completion criteria: all 6 met; working tree holds only phase-94 changes (commit left to harness per protocol) **Next pending phase:** `95_read_truncation_cap` |
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ducoterra
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7909bdb8da |
test(agent): controlled fixture KB + one-command fast loop for tool-calling iterations
The phase-72 iteration loop cleared the database, git-cloned the homelab repo, re-imported 38-51 documents and re-embedded per run — many minutes per iteration against a different KB every time (owner directive 2026-09-04: stop importing the homelab repo on every test run). Replace it with: - tests/fixtures/agent_kb/: 8 hand-written markdown docs (sources 'deployments'/'homelab') whose specifics (rack7, 10.77.42.0/24, VLAN 130, rbm-8842, 17 2 * * *, obsidian-bor:2026.7.14, 18765, 18443, ...) no model can guess; read targets carry non-topical filenames so their questions do not lexically seed them (the read must actually happen) - tests/fixtures/test_kb.dump.sql: data-only snapshot (TRUNCATE + INSERTs incl. embeddings, self-contained git_sources rows, static KB overview) — verified by round-trip checksum at build time - scripts/load_test_kb.py: one-off rebuild (real pipeline + embeddings, ~2s) that also prints the per-question retrieval report (all 10 battery questions must be grounded) - scripts/restore_test_kb.py: sub-second one-transaction restore (no git clone, no re-embedding) - scripts/agent_realmodel_check.py: the gate gains --restore / --mode fixture (curated 10-question battery with one unambiguously correct tool behavior per question) / --turns N (12s micro-loop) / --concurrency / per-turn + total wall timing, and a second accuracy metric (contract accuracy: well-formed calls targeting resolvable entities) alongside the phase-72 locked executed ratio — the re-read of a seeded doc is a copy-invariant model behavior (5 variants, 0/15 flipped) that the dedupe refusal counts as a failure - TOOL_CALLING_TESTING.md: the human-readable methodology (fast loop, design rules, metrics, copy levers + tried-and-reverted table, current standing, open design question) Measured: restore 0.03s; micro-loop ~12s; full loop ~43-55s; concurrency 2/3 gives no gain (endpoint serializes). |
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ducoterra
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8cf3a827ee | feat(agent): search_documents tool — the model can grep the indexed documents for an exact string | ||
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ducoterra
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140b97ebf3 | feat(kb): edit + re-embed document summaries from the viewer (admin) | ||
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ducoterra
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d94f3d5a52 | feat(import): user-extensible BOR_IMPORT_EXTENSIONS — any well-formed extension, A9 family stays the default | ||
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ducoterra
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5d679f5184 |
feat(import): index quadlet unit files and jinja templates (A9 revision)
Phase 47 (owner permission 2026-08-27, TODO.md L10–11, roadmap R1): the
full Podman quadlet family (.container, .network, .volume, .image,
.pod, .kube, .swap, .os, .endpoint) and .j2 Jinja templates join the
allowed + default A9 import formats, chunked as plain text (owner
decision — no TOML/Jinja-aware splitter). No env configuration needed:
a default import now indexes them.
- app/config.py: _ALLOWED_IMPORT_EXTENSIONS + the default
import_extensions CSV gain the ten names (the original seven first);
the never-widen BOR_IMPORT_EXTENSIONS validator is untouched and
still rejects truly unknown extensions.
- app/rag/chunker.py: ten _FORMAT_CHUNKERS entries -> chunk_text
(HARD_MAX_CHARS 1200 honored, unknown-suffix fallback unchanged);
docstring/comments cite the A9 revision 2026-08-27.
- tests/fixtures/docs/homelab/: quadlet/compose.container (realistic
quadlet TOML, >1500 chars, [Unit]/[Service]/[Container] sections,
RESE-QUADLET-SENTINEL-77aa), quadlet/lan.network,
quadlet/cache.volume, templates/deploy.j2 (for/set/if Jinja
constructs + RESE-JINJA-SENTINEL-33dd). Every suite that seeds the
fixture tree updates its 9 -> 13 document-count constants.
- tests/unit/test_config.py: allowed set carries all seventeen formats,
default CSV + dotted import_extension_set include the ten, the
validator accepts the new names and still rejects unknowns.
- tests/unit/test_chunker.py: dispatch parity with chunk_text for every
new suffix (parametrized), the .container fixture chunks >=2 under
the cap with the sentinel surviving, the .j2 fixture keeps {{ }}
verbatim, the unknown-suffix fallback is unchanged.
- tests/unit/test_importer.py: a default-extensions walk over a temp
tree indexes exactly the ten new files (unknown/hidden/excluded
filtered), the original seven still walk, stem-title fallback holds.
- tests/integration/test_import_quadlet_jinja.py (new): import_sources
over a temp tree with .container/.volume/.j2 -> documents + chunks
rows with stem titles; delta re-import updates only the changed .j2
doc; prune drops the deleted .volume doc with cascade.
- tests/e2e/test_quadlet_jinja_import.py (new, story suite, mock-only,
isolation): GET /api/docs (admin session) lists the four new-format
docs with non-zero chunk counts and stem titles; the Sources table
renders a row + .doc-link per file; the phase-26 modal shows the
.container TOML ([Container] section + sentinel) with stem title and
the container format badge; a RESE-JINJA-SENTINEL-33dd question
FTS-matches the .j2 chunk -> honest-positive (A8: LOW requires zero
FTS hits) — the bubble is not .is-deflected and a source chip names
templates/deploy.j2.
- README.md + .env.example: the extended default format set (A9
revised 2026-08-27, plain-text chunking, narrow-only rule intact).
- .agent/PLAN.md: the A9 revision (owner-locked R1) — A9 row status,
the revision note under the anchors table, and the §5 chunking-policy
+ §11 workflow lines. The only PLAN edit this phase.
Gates: uv run pytest 795 passed; app/ coverage TOTAL 99% (>90%);
ruff check + pyright clean; story E2E 4/4 in isolation (DB up);
regression E2E suites test_import_documents (3) / test_sync_button
(3) / test_git_sources_admin (6) green in isolation.
Also records the 47_quadlet_jinja_import task-file moves (01–03)
todo/ -> complete/.
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ducoterra
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bc70ce36e0 |
feat(chat): render markdown tables in answers, viewer, and thinking
GFM pipe tables in the shared renderer (TODO.md L6): a table-protection
pass in frontend/assets/markdown.js (fences -> tables -> escape order)
pulls each header+separator+body block out as a placeholder, renders
cells escape-first with the same inline transforms, and reinserts a
semantic <table class="md-table"> inside a horizontal-overflow
.md-table-wrap — so a pipe table in a chat answer, the document
viewer/modal, and the thinking block all render the same semantic
table. Fences win over tables; lone pipes stay text.
- styles.css: .md-table palette rules (PLAN §7.2 tokens, no motion);
min-width: max-content so a WIDE table keeps its natural width and
the wrapper is the real scroller (width:100% alone wrapped the wide
table's cells — proven by the new E2E).
- mock_llm.py: TABLE_TRIGGER ("show me a table") -> byte-stable
TABLE_ANSWER (3-column table, <img onerror> XSS probe line, wide
5-column table), checked before DEFLECT_MODE like SUMMARY_MODE.
- tests/fixtures/docs/homelab/tables.md: 3x3 pipe table + pipe-heavy
fenced block (viewer/fence subject); the shared fixture set grows
8 -> 9 docs, so every suite pinning the count (added/formats/
stat-docs/EXPECTED_ROWS) is updated accordingly.
- tests/e2e/test_markdown_tables.py (new, story suite): chat table
shape + non-deflection, wide-table wrapper scroll (no page
overflow), XSS probe inert, viewer modal table, fence-not-a-table,
lone pipe stays text.
- tests/e2e/test_agent_document_tools.py: fix a pre-existing flake —
the "Calling tool…" label window is ~0.4 s at the mock's 0.1 s
tool-frame pacing, and a polling expect could stride over it
(failed 3 of 5 runs on the committed baseline). The pre-submit
MutationObserver record is the deterministic source of truth; the
racy to_have_text gate is gone.
uv run pytest: 738 passed, app/ coverage 99% (TOTAL unchanged);
ruff + pyright clean; story E2E 6/6 in isolation; regression E2E
suites (chat_rag, document_viewer, document_summaries, smoke) green.
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ducoterra
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572a4190a6 | feat(rag): lite-model document summaries — non-markdown docs summarized at import, summary chunk retrieves and resolves to the full source doc | ||
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ducoterra
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7e8d14702e | feat(rag): hybrid FTS+vector retrieval and multi-format ingestion — name-your-tool questions find the right document | ||
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ducoterra
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022da8e2bc |
feat: scaffold Brain of Reese — FastAPI RAG chat over Postgres 17 + pgvector
Foundation (phase 01, verified): - FastAPI app: /api/health, /api/suggestions, /api/chat (placeholder), static frontend served locally (no CDN) - Postgres 17 + pgvector via db/Containerfile + compose.yaml (podman compose up -d db), Alembic initial migration (documents, chunks with vector(768), query_log) - LLM client targeting https://aipi.reeseapps.com/v1 (turbo/embed); scripts/llm_probe.py verified models + 768-dim embeddings live - Conditional debugpy: imported only when DEBUGPY=1 (attach on demand, :5678); logging config for clean single-line logs - Frontend shell: mobile-first chat + Sources pages, tokens, a11y baselines - Tests: 24 unit+integration (99% coverage on app/), ruff + pyright clean, Playwright smoke E2E (3 tests) against a deterministic mock LLM - Planning: .agent/PLAN.md (architecture + LOCKED decisions), AGENTS.md, 6 user stories, 7 phase files (one story / one phase / one Playwright suite each) |