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Commits
| Author | SHA1 | Message | Date | |
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 ducoterra
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d731169b8b |
phase: 105_hidden_folders_toggle
All completion criteria verified. Everything is green. **Phase 105 final verification pass — all criteria verified** - Verified the full implementation in the working tree: `git_sources.include_hidden` column + alembic `0019` (dev DB at head, column present), `iter_importable_files`/`import_sources` flag support with `str(root)`-keyed map used by both walk and progress pre-walk, `GitSourcePatchIn` rename with optional fields, sync/CLI pipeline wiring (OR-collision), and the per-row "Hidden" checkbox + tag + error line on the Sources page - Unit + integration: `uv run pytest` → exit 0 (2148 tests collected, all pass; this sandbox occasionally swallows pytest's final status line — exit codes verified) - Coverage: `uv run pytest --cov=app --cov-report=term-missing` → **TOTAL 99%** (3879 stmts, 15 miss) — >90% gate ✓ - Dedicated E2E: `uv run pytest tests/e2e/test_hidden_folders_toggle.py -v --no-cov` → **6 passed in 23.20s** (DB up, in isolation) - Regression E2E in isolation: `test_source_ignore_paths` 6 passed, `test_git_sources_admin` 6 passed, `test_local_directory_sources` 3 passed, `test_sync_button` 3 passed, `test_smoke` 3 passed - Lint/types: `uv run ruff check .` + `uv run pyright` → clean (0 errors/warnings) **Completion criteria:** (1) checkbox persists via PATCH 200 → "hidden on" tag + GET round-trips `include_hidden: true`; failure path reverts box + `role="alert"` canned message ✓; (2) flag OFF byte-identical (only `visible.md` indexed), ON indexes `.hidden/note.md` into the KB catalog, `EXCLUDED_DIRS` excluded both states ✓; (3) A2: flag OFF → `detail.pruned==1`, doc gone from catalog ✓; (4) PATCH bool-only/list-only/both/neither no-op, phase-89 fixed 422s unchanged, 404, anonymous 403 (incl. bool-only body) ✓; (5) env-fallback rows render no checkbox, WCAG-clean (aria-label, keyboard focus, visible label, text tag) ✓; (6) full gate green ✓; (7) commit left to the harness per instructions (no `git add`/`commit` run; phase files untouched). **Deviations:** none — no defects found; no code changes were needed on this pass. **Next pending phase:** `.agents/phases/todo/98_sync_summary_visibility`. |
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ducoterra
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3095c4c577 |
phase: 90_upload_no_scan
All verification is complete and green. Final report:
**Phase 90 (upload_no_scan) — final verification pass: all criteria verified, no fixes needed**
- Verified (not re-implemented): all 3 tasks already complete; working tree carries the phase's uncommitted changes
- Upload pipeline: `_run_upload` stops after row upsert; success = `{"message": "uploaded"}`, null/0/0 progress; `UploadOut` removed from `app/schemas.py`; gates/unpack/swap/failed states intact
- Copy: button "Upload", bare "Processing…", result line "Uploaded \<name\> — press Sync sources to import it."; hint + caption re-pointed at Sync; no "Upload &" remnants in `frontend/`
- Tests: `pytest tests/unit/test_git_sources.py tests/integration/test_git_sources_upload.py tests/unit/test_frontend_sync_upload.py` → 56 passed; E2E phase suite `tests/e2e/test_upload_no_scan.py` → 3 passed (zero docs after upload; ignore edit honored by Sync — 2 added, `notes/skipme.md` excluded; re-upload in-place, still zero docs); affected suites `test_archive_upload_sources.py` + `test_sync_upload_progress.py` + `test_source_removal_cleanup.py` → 15 passed
- Full suite: `uv run pytest --cov=app --cov-report=term-missing` → **1808 passed, 99% coverage** (>90%); `uv run ruff check . && uv run pyright` → clean, 0 errors
**Completion criteria:**
1. Upload settles "ready for sync", zero docs, row + ignore editor — ✅ (E2E test 1)
2. Button "Upload", no "Upload &" copy — ✅ (`rg` empty in frontend/, app/, tests/)
3. RAG-page "Sync sources" imports upload honoring edited ignores — ✅ (isolated E2E test 2)
4. Suite green, >90% coverage, lint clean — ✅ (99%, ruff+pyright clean)
5. Atomic commit — ✅ left to harness per executor rules (no git add/commit run; tree staged-ready)
**Deviations:** `regenerate_overview` still appears once in `git_sources.py` — inside `delete_git_source` (phase-69 locked total-removal behavior, not the upload leg; upload leg is scan-free). `.agents/PLAN.md` does not exist in this repo; locked decisions A1–A4 were enforced from the phase files.
**Next pending phase:** `91_admin_theme_tab` (in `todo/`).
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ducoterra
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8c706259e9 |
phase: 89_source_ignore_paths
All verification complete — TODO.md was already cleared in the roadmap commit; the two extra unit-test diffs are necessary fake-signature adaptations for the new keywords. Everything is green, no fixes were needed. ## Phase 89 — final verification pass: ALL GREEN **Verified (all 6 task files present in `complete/`):** - `git_sources.ignore_paths` JSONB column + migration 0013; `alembic downgrade -1 && upgrade head` round-trips (head `0013`) - Importer: `normalize_ignore_path`/`is_ignored`/`_ignore_for_root`, `ignore` in walk + progress pre-walk, `ignore_by_root` in `import_sources` - API: GET/POST carry list; admin-only `PATCH` (replace, 404/422 fixed details, anonymous 403) - Pipelines wired: `_run_sync`, `_run_upload` re-upload, `scripts/import_docs.py` - Sources-page box: dialog, §7.4 save lifecycle, `N ignored` tag, a11y; env rows get no box **Test/lint results:** - `uv run pytest` → 1808 passed - `uv run pytest --cov=app --cov-report=term-missing` → TOTAL **99%** (>90%) - `uv run pytest tests/e2e/test_source_ignore_paths.py -v --no-cov` → 6 passed (isolated, DB up) - Regressions in isolation: `test_git_sources_admin` 6, `test_archive_upload_sources` 5, `test_sync_button` 3, `test_smoke` 3 — all passed - `uv run ruff check . && uv run pyright` → clean (0 errors) **Completion criteria:** box→PATCH 200→count+GET round-trip ✅ · sync excludes `ignore/` (no docs/chunks/embeddings/summaries) + prunes newly-ignored (pruned==2) ✅ · no-mid-path rule E2E ✅ · PATCH 404/422/replace/clear/403 ✅ · full gate green ✅ · commit + phase move left to harness per rules. **Deviations:** none blocking — E2E pins `files == 4` (overview's "5" was an off-by-one vs its own 6-file tree, documented in-test); `tests/unit/test_importer.py` + `test_sync_button.py` test-double fakes extended for the new keywords (needed for the suite to stay green). **Next pending phase:** none — `todo/` holds only this phase. |
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ducoterra
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7fce6572d0 |
feat: phases 77–80 — navbar view refresh, static background, API tokens, history suggestion chips
Single consolidated commit for four completed, validated phases (77, 78, 79, 80). The pipeline run left all work uncommitted because the harness commits only with PHASE_COMMIT=1 while child executors are forbidden from committing; the phases themselves all passed validation and moved to .agents/phases/complete/. Phase 77 — navbar view refresh - router.js dispatches bor:view-refresh on re-show / active re-click / popstate (gated on wasMounted; first show and boot exempt) - History / RAG / Sources / Tuning re-fetch on refresh (admin branch); Chat deliberately excluded (stream survival) - History "Refresh" button (admin-only, in-flight disable + status line) - New story suite tests/e2e/test_navbar_refresh.py (7 tests) Phase 78 — static background - Removed the animated glow layers; static 44px grid over the flat --bg canvas; default and reduced-motion renders byte-identical - Updated background/theme E2E suites; removed bg-glow test pins Phase 79 — API tokens - api_tokens model + migration 0012; hash-only token service - Admin tokens API + Tokens admin view; POST /api/token-auth; live-revoking require_user on chat / suggestions / document content - Frontend token gate with localStorage cache; anonymous E2E suites migrated to token login - New story suite tests/e2e/test_api_tokens.py (9 tests) Phase 80 — history suggestion chips - last_questions() endpoint with SEED fallback; startNewChat() refetch - Seed-semantics docs (config.py, .env.example, README) - Integration state matrix + E2E suite rewritten to the 4 chip states Also included: phase-76 report artifacts and the repo restore-test-db skill (previously untracked), scripts/* ruff fixes from phase 77. Final gate state (phase 80 final pass, covers everything above): - uv run pytest --cov=app → 1637 passed, 0 failed, app/ coverage 99% - uv run ruff check . && uv run pyright → clean, 0 errors - Per-phase story E2E suites green in isolation |
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ducoterra
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ffa919b8bf |
fix(chat): keep in-flight answers alive across in-app view switches
Root cause (owner repro, verified in a real browser 2026-09-06): the five navbar views (Chat, RAG, Sources, Tuning, History) were separate HTML documents, so a navbar click was a REAL cross-document navigation — the chat page unloaded, the in-flight SSE fetch was aborted, and the phase-48 teardown (app/api/chat.py `finally`, "chat: turn cancelled") stopped the model. Observed: send question -> click RAG mid-stream -> click Chat -> the answer never finished: no `query_log` row, and on return a dangling question with no brain record (the pre-token pagehide partial persist skips because `acc` is empty). Phase-48 LOCKED-DECISION REFINEMENT (owner-confirmed 2026-09-06, flagged per AGENTS.md rule 3, not silently deviated): "real navigation cancels the fetch" now means LEAVING THE APP — tab close, external/other-document navigation, the Stop button. In-app navbar switches are client-side view switches and no longer cancel. Fix — Option A (SPA shell), chosen over B (Service Worker owns the stream) and C (server-side turn registry + resume): - frontend/index.html is the shell: ONE `<main id="main">` holds the five `<section class="view">` blocks; hidden views carry BOTH `hidden` and `inert` (WCAG — no focus/keyboard traversal). The shared header, the single `doc-modal-*` skeleton, and the `#app-version` footer each exist exactly once; the per-view copies from the four folded pages are dropped. - New frontend/assets/router.js (vanilla module — no framework, no bundler, No-CDN rule intact): lazy-imports a view module on FIRST show only (mount-once, hide-forever — the chat view's in-flight SSE reader persists across switches; that persistence IS the fix); intercepts same-shell navbar links with preventDefault + history.pushState (never a document load); handles popstate; single writer of `.nav-link` active state (is-active + aria-current), document.title, and the per-view meta description (values carried over from the old pages' heads, brand-resolved at write time). - Each folded page's JS becomes `export async function mount(root)` — root-scoped queries; `initSharedHeader()` dropped (the header boots once in the shell via the chat module; the admin flag comes from the same cached `fetchIsAdmin()` promise — zero extra requests). - app/main.py: a small list-driven route factory serves the shell for /tuning.html, /sources.html, /git-sources.html, /history.html — registered AFTER the API routers and BEFORE the static catch-all (routes-first). The phase-33 caching middleware applies no-cache + `?v=` rewriting unchanged; app/core/caching.py needed NO change (the view paths did not change — pinned by the integration tests). - The four old view .html files are DELETED (one source of truth); deep links to the old URLs keep working (the router picks the view from the pathname); `/?chat=<id>` is unaffected; the Containerfile bundles router.js (inlining the lazy view modules) and drops the folded page files. - app/schemas.py: HistoryTurn.text cap 4000 -> 32000 — the shell keeps long saved answers in the chat, and the old cap (stricter than the 24_000-char total history budget) 422-rejected any second turn in such a chat (found by the phase-42 E2E suite on the shell). Boundaries: login.html, shared.html, doc-edit.html, document.html REMAIN separate documents (flow pages, not navbar tabs); a mid-stream navigation to doc-edit/document.html still cancels per phase 48 (follow-up candidate, out of scope). The SSE API is unchanged. Real departures still cancel the turn — phase 48 intact (pinned by tests/e2e/test_stop_generation.py, unchanged, and by the new suite's real-departure control). Tests: - Phase-20 suite REWRITTEN to the new semantics (tests/e2e/test_sources_midstream_bug.py): a navbar switch no longer cancels — the stream survives the switch and the FULL answer settles; the pagehide partial persist REMAINS for real departures (the partial's exact shape — first streamed chunk prefix, no done metadata — is still pinned there). - NEW story suite tests/e2e/test_nav_switch_keeps_stream.py (mock LLM): the owner repro (send -> RAG mid-stream -> Chat: window sentinel survives = same document, FULL answer, exactly one brain turn in bor.chat.v1, exactly one settled query_log row, auto-saved row matches) + the same mid-stream switch against the other three views + the real-departure-still-cancels control + the no-switch baseline. - tests/unit/test_frontend_router.py: source-level pins of the router invariants (click interceptor targets ONLY same-shell view paths, pushState-only switches, mount-once guard, hidden+inert pair, single-writer active state/title); shell-route integration tests (each folded path serves the shell with no-cache + `?v=` body; a non-view path still 404s); the file-reading unit pins re-pointed at the shell (the four view files are gone — the shell is the source of truth). Verification (this commit): full suite green — 1565 unit+integration tests, app/ coverage 99% (>90% floor); ruff + pyright clean; the phase's E2E suites green in isolation (house protocol, AGENTS.md rule 9). Owner repro verified in a real browser against the real LLM (dev server :8010, headful Chromium): "tell me about everquest" -> RAG mid-stream -> Chat — the answer completed with one brain bubble and no error banner, `query_log` gained exactly one settled row (deflected=True: the dev KB holds no EverQuest docs — the settle, not the topic, is the proof), zero "chat: turn cancelled" lines for that turn; the control (real navigation to /shared.html mid-stream) still cancelled (no settled row, the cancel line logged, the partial persisted on return). Screenshots: .agents/screenshots/76_manual_*. Phase 76 (76_spa_nav_shell) complete — moved to .agents/phases/complete/. |
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ducoterra
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137d5fa1a5 | feat(sources): removing a source deletes its files and index entries behind a confirmation modal | ||
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ducoterra
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4677d86f49 | feat(sources): real-time file progress for sync and upload — background upload with success toast | ||
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ducoterra
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03d26255c6 |
feat(sources): upload tarball/zipfile archives as sources — unpack, scan, and replace in place
Phase 49 (owner request, chat 2026-08-28: "The git sources page should remove local directory and should instead accept a tarball or zipfile upload which it will unpack and scan … reuploading the same tarball should not create a new folder, but should unpack and overwrite the previously unpacked content" — design confirmed in the same conversation): * POST /api/git-sources/upload (admin-only, require_admin): accepts .tar/.tar.gz/.tgz/.zip, streams it with the BOR_UPLOAD_MAX_MB cap (bounds BOTH the compressed upload and the total extracted bytes — zip-bomb guard), safely unpacks (absolute/traversal/symlink/hardlink escape and device/FIFO members rejected), and atomically swaps the content in over BOR_UPLOAD_DIR/<name>/ (name = filename minus the archive suffix — no missing window, a failed upload never touches the existing folder/row/KB). The git_sources row is upserted by path (kind='local', no duplicates, added_at preserved), the models are checked fail-fast (503 sanitized when down — the folder/row stay committed and the next sync/re-upload retries idempotently), and the source is scanned synchronously in the request (single-source import_sources prune=True + change-gated KB overview), answering 200 with the sync-style counts. One upload at a time (409); the request session is released before the scan so a concurrent TRUNCATE cannot deadlock against it. * app/rag/archive_upload.py: ArchiveUploadError, ARCHIVE_SUFFIXES, archive_source_name (safe-name derivation), unpack_archive (guarded zip/tar extraction with the extracted-byte cap, no partial state), swap_in (atomic replace with restore-on-failure) — fully unit-tested. * app/config.py + .env.example: BOR_UPLOAD_DIR (default ~/bor-sources/uploads, deliberately separate from the git checkouts) and BOR_UPLOAD_MAX_MB (default 512; a validator fails loud at startup on <= 0). * python-multipart added to the dependencies — FastAPI's required multipart parser (an A2 implementation detail, phase locked decision). * The Sources page: the phase-38 "Add a local directory" form is removed; #archive-upload-form takes its place (labeled file input, "Upload & scan" button, the §7.4 never-stale lifecycle, inline role=alert error, role=status count line); hint + table caption updated. The POST /api/git-sources kind=local API contract is UNCHANGED — a plain directory is still registrable via the API, and existing Local rows list/remove/sync exactly as before. * The phase-38 story E2E (test_local_directory_sources.py) is rewritten API-driven — the form it drove is gone; its acceptance stands. * The story E2E (test_archive_upload_sources.py): the swap, upload→scan→list (the deterministic "Uploading…" in-flight state, the Local row, /api/docs + the RAG catalog), same-filename re-upload (in-place replace, prune, no duplicate row, v2-only folder), the 422 inline error + recovery (the form is not wedged), and the anonymous gate + 403. * README: the archive-upload section (formats, naming rule, in-place replace, both new settings), the local-directory form removal noted, config reference rows for BOR_UPLOAD_DIR / BOR_UPLOAD_MAX_MB. Gates: unit+integration green, app/ coverage 99%, the story E2E green in isolation, the regression suites (git sources admin, local directory sources, sync button, import documents, nav rename, smoke, shared header) green in isolation, ruff + pyright clean. Note: per this phase's file-level staging, frontend/assets/styles.css also carries the small same-day in-flight owner rework already in the working tree (the .sign-in-mobile companion rule for the phase-48 mobile sign-in copy); the phase-49 change is the upload form's block. |
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ducoterra
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03bead092c | various fixes | ||
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ducoterra
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94d7228510 |
feat(admin): local directory sources — kind/path on git_sources, combined sync + import, page form + badges
An existing, non-git directory is now a first-class source alongside
the git repos: one table (git_sources + kind discriminator — A13
reversible migration), one admin page, one Sync button (phase locked
decisions; the phase-35 table is extended, not duplicated). The DB is
the local-source registry — no env var for local paths;
BOR_GIT_SOURCES stays a git-only empty-table fallback.
Migration 0007 (reversible, up/down integration-tested):
git_sources.kind TEXT NOT NULL DEFAULT 'git' + ck_git_sources_kind
(kind IN ('git','local')); git_sources.path TEXT NULL +
uq_git_sources_path (mirrors 0006's uq_git_sources_url). Existing rows
read kind='git', path=NULL.
API (phase-35 contract extended, git byte-identical): POST kind=local
requires path — trimmed, ~-expanded, absolute + an existing server
directory, else 422 naming the path (fail loud at add-time); duplicate
path 409 (named); wrong field combos 422. GET rows carry kind + path
(git and env rows: path null); anonymous still 403 on every route (A10).
Sync + import_docs resolve DB git + local rows together: git →
clone_or_pull (unchanged); local → re-verified .is_dir() AT SYNC TIME
(it may have moved/deleted since add-time) — a missing dir raises
"local source missing: <path>" (sanitized) before anything imports;
one import_sources(..., prune=True) over the single combined list
(pruning covers the union). Both-empty fails loudly ("no sources
configured (git or local)"); --source still wins; the env fallback
stays git-only.
Page: second "Add a local directory" form (the same §7.4 never-stale
button + inline-error lifecycle as the git form; 422/409 details name
the path), Git/Local badges on rows (text + color, never color alone —
WCAG), updated hint (git + local together, union prune); the
anonymous sign-in gate is unchanged.
Tests: 0007 up/down; the API local-kind matrix (403/201/422/409) with
the git-kind suite green unchanged; the sync pipeline local/git/
mixed/missing against a host temp dir (the KB actually updated);
import_docs DB resolution + --source precedence. Story E2E (isolated,
deterministic across runs): add (Local badge) → missing path inline
422 naming it / duplicate 409 → the real Sync button imports the
fixture file (GET /api/docs + sentinel in its content) → file deleted
+ sync prunes it (union prune) → row removed; anonymous gate + 403s
(phase-35 regression). test_git_sources_admin.py (phase 35) green
UNCHANGED — no selector collision with the new form;
test_sync_button.py green.
Docs: README — the two managed kinds (git = clone/pull mirror; local =
direct in-place walk), add-time validation, union pruning, "the DB is
the local-source registry (no env var for local paths)";
.env.example — the env fallback is git-only.
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ducoterra
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1925bb66a8 | feat(sources): admin page to add and remove git sources (TODO.md L4) |