Commit Graph
77 Commits
Author SHA1 Message Date
ducoterra 801639efcc feat(agent): align the document tools with the harness-trained shape — ls, read(path), grep(pattern, path?) 2026-09-03 11:17:47 -04:00
ducoterra 0bf96f22e1 fix(agent): make read_document robust to combined source/path arguments
The model treated the combined 'source/path' string (as printed in
search result lines, read-result headers and refusals) as the
document's identity and passed it as 'source' — e.g.
source='homelab/active/container_caddy/caddy.md' instead of
source='homelab', path='active/container_caddy/caddy.md'.

- Rewrite the read_document description with the split rule (source =
  before the FIRST '/', path = after it) and a worked example; share
  the source/path parameter descriptions between read_document and
  search_documents; map search result lines back onto the split.
- New _resolve_document: on a lookup miss with a '/' in source, retry
  at the first slash (source names are directory basenames and can
  never contain '/'), plus a continuation candidate for a split at a
  later slash; a self-corrected combined form for an already-in-context
  document is still rejected as ALREADY_IN_CONTEXT.
- A slash-carrying source that matches nothing gets an educational
  refusal naming the corrected arguments instead of the generic line
  that repeated the combined form.

Verified live against aipi (lite) + the imported homelab KB: A/B on
the exact failure scenario (5 runs each, right after a
combined-source search result) — old descriptions 5/5 combined, new
descriptions 5/5 clean; two live UI turns (Playwright) produced only
clean split arguments, including a multi-hop read of
install_caddy_deskwork.yaml that landed in done.sources. Full suite:
1376 passed, app coverage 99% (agent.py 100%), ruff + pyright clean,
agent/search E2E green in isolation.
2026-09-02 17:42:57 -04:00
ducoterra 137d5fa1a5 feat(sources): removing a source deletes its files and index entries behind a confirmation modal
Build and Push Containers / build-and-push-app (push) Successful in 1m29s
Build and Push Containers / build-and-push-db (push) Successful in 11s
2026-09-02 15:55:33 -04:00
ducoterra 8cf3a827ee feat(agent): search_documents tool — the model can grep the indexed documents for an exact string
Build and Push Containers / build-and-push-db (push) Canceled after 0s
Build and Push Containers / build-and-push-app (push) Canceled after 1m11s
2026-09-02 12:04:34 -04:00
ducoterra 88293ed02f feat(rag): retry a failed LLM request before the first token lands — BOR_LLM_RETRIES/BOR_LLM_RETRY_DELAY with a live 'retrying' status 2026-09-02 10:52:38 -04:00
ducoterra f04ddbe1f8 fix(web): history tab copy — every chat saves automatically, there is no Save button
Build and Push Containers / build-and-push-app (push) Successful in 1m35s
Build and Push Containers / build-and-push-db (push) Successful in 10s
meta description -> locked (A3) auto-save string (history.html L6).
page-sub -> locked (A3) string, the <strong>Save</strong> emphasis retired with the button (L106-109).
empty row -> locked (A3) string; colspan=6, hidden, and row id untouched (L163).
h1, the anonymous gate section, and history.js are byte-identical — state language verified accurate.
2026-09-02 01:29:42 -04:00
ducoterra 8a1f99cb38 feat(web): move the chat action cluster to the pinned bottom and align the button sets
- task 01: relocate the .chat-actions row (New chat + Share, comments byte-identical with a Phase 65 note) from the top of the column to the bottom of .chat-shell, directly above the composer
- task 02 (owner-locked A1): wrap the row + #composer in ONE sticky .chat-bottom unit (position: sticky; bottom: env(safe-area-inset-bottom, 0), no z-index) — the pills stay at the bottom of the screen at every scroll position and settle into flow above the footer
- task 03 (owner-locked A2): right-align the bottom row to the column's right edge (justify-content: flex-end), mirroring the right-aligned Save-as-doc corner; the five action pills share one 44px / 999px-pill geometry
- task 04: dedicated Playwright suite tests/e2e/test_bottom_chat_actions.py (resting geometry, the A1 pin across the sticky range, A2 alignment + DOM order + mobile stack + 360px overflow bound + 44px touch targets, New chat / Share click-through) — green in isolation
- task 05: regression matrix green in isolation (pinned_composer 4, save_share_ux 5, chat_persistence 4, share_chat 4, chat_history 5, smoke 3); full gate green — unit + integration pass, app/ coverage 99% (>90%), ruff + pyright clean
2026-09-02 01:08:18 -04:00
ducoterra 4677d86f49 feat(sources): real-time file progress for sync and upload — background upload with success toast 2026-09-01 23:51:43 -04:00
ducoterra 15a16a8fe0 fix(agent): unambiguous document listing format for LLM parsing
Build and Push Containers / build-and-push-app (push) Successful in 1m34s
Build and Push Containers / build-and-push-db (push) Successful in 10s
2026-09-01 12:44:53 -04:00
ducoterra c738105932 feat(web): customizable placeholder, footer text, and color theme via BOR_* env vars
BOR_INPUT_PLACEHOLDER / BOR_FOOTER_TEXT / BOR_THEME (+ the indigo.css example theme); authoring guide: frontend/assets/themes/README.md, docs: README 'Customizing the look'.
2026-09-01 12:04:06 -04:00
ducoterra baefcde668 fix(web): retire the stale homelab-era copy — neutral, accurate defaults on every page
Fixed: index.html meta description, empty-state sub and composer
placeholder (A1); app/config.py default suggestion chips → the four
neutral A2 defaults (BOR_SUGGESTIONS override unchanged); sources.html
KB page-sub → the current source model (git repos + local dirs +
uploaded archives, Sync pulls/imports); git-sources.html example URL
→ your-repo.git (A3); all 9 footers → neutral default in
span.footer-text (the phase-62 hook); E2E/unit conftests force the
code defaults so a local .env cannot leak corpus copy into tests;
new unit text pins + dedicated E2E suite.

Task 02 verification read-through — no change needed:
- sources.html sync result/error copy (matches the real sync behavior)
- tuning.html page-sub (accurate as written)
- history.html page-sub (accurate as written)
- doc-edit.html page-sub (accurate as written)
- git-sources.html page-sub (accurate as written)
- #sources-gate anonymous copy (accurate as written)
2026-09-01 10:54:50 -04:00
ducoterra 5fa620fde5 fix(web): keep the navbar stuck to the top — drop the body height cap on the sticky range
Build and Push Containers / build-and-push-app (push) Successful in 2m28s
Build and Push Containers / build-and-push-db (push) Successful in 11s
2026-09-01 04:20:26 -04:00
ducoterra 725af9fac1 feat(docs): save chat answers as docs — edit screen, commit + push to the .env docs branch 2026-09-01 03:52:03 -04:00
ducoterra 7b7a834a1a feat(web): 2x reading column on wide desktops — 92rem at >=1500px (chat, shared, document view) 2026-09-01 00:39:19 -04:00
ducoterra 140b97ebf3 feat(kb): edit + re-embed document summaries from the viewer (admin) 2026-08-31 23:52:22 -04:00
ducoterra d94f3d5a52 feat(import): user-extensible BOR_IMPORT_EXTENSIONS — any well-formed extension, A9 family stays the default 2026-08-31 22:42:41 -04:00
ducoterra 914097abcf feat(chat): save by default + share anonymously — auto-saved chats, guest-facing Share, success toast, action row 2026-08-31 05:20:25 -04:00
ducoterra c564e317ed fix(web): never 304 a rewritten page — pages drop conditional validators, assets keep them 2026-08-31 01:35:28 -04:00
ducoterra 32b7bfd4b3 feat(chat): invalidate saved chats on sources sync — versioned stamps, stale marker, Regenerate against the new index 2026-08-30 23:39:15 -04:00
ducoterra aba8615177 fix(chat): rest the composer at the viewport bottom — sticky alone left it mid-screen
Phase 52's first pass shipped `position: sticky; bottom` on `.composer` and
called the phase done, but the owner's requirement — "the chat message-input
textarea should be at the bottom of the screen" — still failed in the browser:
on an empty/short chat the input rested just under the empty state (~57% of
the viewport) with a dead band down to the footer.

`position: sticky` can only pull a box UP toward the scrollport's bottom edge;
it can never push a box DOWN to meet it, so on a page that does not overflow
it is a no-op. The old story suite only exercised an overflowing conversation
(one test even asserted the buggy resting position as expected), which is why
the half-fix passed.

- `.messages { flex: 1 1 auto }` — absorbs a short page's free space so the
  composer's resting in-flow position is the bottom of the full-height column
  (body min-height:100dvh -> .app-main flex:1 -> .chat-shell flex:1); basis
  stays `auto`, no height cap, no overflow — the document stays the scroller
- `.composer { bottom: env(safe-area-inset-bottom, 0) }` — the explicit 0
  fallback replaces the env()-only offset, which degraded to `auto` (no pin)
  wherever env() is unsupported
- E2E: `test_empty_chat_composer_sits_in_normal_flow` ->
  `..._at_the_screen_bottom` (chrome-only band below the resting composer);
  the phone suite now checks the resting position as well as the pinned one
- Unit pins: the flex-grow half and the full-height column are pinned, so the
  fix cannot silently regress to sticky-only

Still CSS-only — no DOM change, no JS, no new scroll call site (phase 42
never-auto-scroll contract intact), no z-index.

Verified: 1019 unit/integration tests pass (app/ coverage 99%), ruff and
pyright clean; tests/e2e/test_pinned_composer.py green in isolation (4), plus
the stop/autoscroll/persistence/mobile-nav suites and 14 layout/scroll
neighbours green in isolation.
2026-08-30 16:14:18 -04:00
ducoterra 820753948e feat(chat): pin the composer to the viewport bottom — Stop is always reachable while reading 2026-08-30 14:59:40 -04:00
ducoterra 114b115034 feat(chat): share a chat by link — anonymous read-only /shared/<token> page, share/unshare 2026-08-30 01:34:44 -04:00
ducoterra ece93a7c8f feat(chat): save and view chat history — admin-only saved_chats, History page, open-a-chat return 2026-08-29 21:22:25 -04:00
ducoterra 6832957ab0 feat(chat): retry the last answer — redo-in-place Retry button on the latest brain bubble 2026-08-29 18:32:15 -04:00
ducoterra 1a60ecbd8b feat(chat): stop an in-flight answer — Send becomes Stop, the partial is kept and persisted, the model stream is torn down 2026-08-29 17:27:04 -04:00
ducoterra 6bf7f456d4 show sync button for admin
Build and Push Containers / build-and-push-app (push) Successful in 1m38s
Build and Push Containers / build-and-push-db (push) Successful in 11s
2026-08-28 23:24:23 -04:00
ducoterra 3a404eb161 fix(chat): stop the submit up-hop and keep the thinking pin alive across paragraph breaks
Build and Push Containers / build-and-push-app (push) Successful in 3m55s
Build and Push Containers / build-and-push-db (push) Successful in 13s
- scrollReveal lands at the document bottom (window.scrollTo) instead of
  scrollIntoView({ block: 'end' }): the old alignment sat above the
  in-flow composer, so every Enter hopped the page up by the
  composer+footer height and pushed the composer below the fold.
- The thinking window's pin state is now captured BEFORE the re-render
  (const pinned = block.open && isThinkingNearBottom(textEl)): the
  post-render distance read the new chunk's rendered height, not the
  user's position, so any chunk taller than the 32px band (real-model
  deltas, '\n\n' paragraph breaks) killed the follow at the first
  2-newline gap.
- Mock LLM: new 'think in paragraphs' trigger (scratchpad with real
  blank-line breaks, 60-char frames) — the 12-char mock frames never
  rendered past the band, which is why the bug survived the E2E gates.
- E2E (both verified red against the old code):
  test_submit_does_not_hop_up, test_thinking_window_follows_across_paragraph_breaks.
- Unit source-marker tests updated to the new contracts.
2026-08-28 17:10:02 -04:00
ducoterra 03d26255c6 feat(sources): upload tarball/zipfile archives as sources — unpack, scan, and replace in place
Phase 49 (owner request, chat 2026-08-28: "The git sources page should
remove local directory and should instead accept a tarball or zipfile
upload which it will unpack and scan … reuploading the same tarball
should not create a new folder, but should unpack and overwrite the
previously unpacked content" — design confirmed in the same
conversation):

* POST /api/git-sources/upload (admin-only, require_admin): accepts
  .tar/.tar.gz/.tgz/.zip, streams it with the BOR_UPLOAD_MAX_MB cap
  (bounds BOTH the compressed upload and the total extracted bytes —
  zip-bomb guard), safely unpacks (absolute/traversal/symlink/hardlink
  escape and device/FIFO members rejected), and atomically swaps the
  content in over BOR_UPLOAD_DIR/<name>/ (name = filename minus the
  archive suffix — no missing window, a failed upload never touches the
  existing folder/row/KB). The git_sources row is upserted by path
  (kind='local', no duplicates, added_at preserved), the models are
  checked fail-fast (503 sanitized when down — the folder/row stay
  committed and the next sync/re-upload retries idempotently), and the
  source is scanned synchronously in the request (single-source
  import_sources prune=True + change-gated KB overview), answering 200
  with the sync-style counts. One upload at a time (409); the request
  session is released before the scan so a concurrent TRUNCATE cannot
  deadlock against it.
* app/rag/archive_upload.py: ArchiveUploadError, ARCHIVE_SUFFIXES,
  archive_source_name (safe-name derivation), unpack_archive (guarded
  zip/tar extraction with the extracted-byte cap, no partial state),
  swap_in (atomic replace with restore-on-failure) — fully unit-tested.
* app/config.py + .env.example: BOR_UPLOAD_DIR (default
  ~/bor-sources/uploads, deliberately separate from the git checkouts)
  and BOR_UPLOAD_MAX_MB (default 512; a validator fails loud at
  startup on <= 0).
* python-multipart added to the dependencies — FastAPI's required
  multipart parser (an A2 implementation detail, phase locked decision).
* The Sources page: the phase-38 "Add a local directory" form is
  removed; #archive-upload-form takes its place (labeled file input,
  "Upload & scan" button, the §7.4 never-stale lifecycle, inline
  role=alert error, role=status count line); hint + table caption
  updated. The POST /api/git-sources kind=local API contract is
  UNCHANGED — a plain directory is still registrable via the API, and
  existing Local rows list/remove/sync exactly as before.
* The phase-38 story E2E (test_local_directory_sources.py) is rewritten
  API-driven — the form it drove is gone; its acceptance stands.
* The story E2E (test_archive_upload_sources.py): the swap,
  upload→scan→list (the deterministic "Uploading…" in-flight state, the
  Local row, /api/docs + the RAG catalog), same-filename re-upload
  (in-place replace, prune, no duplicate row, v2-only folder), the
  422 inline error + recovery (the form is not wedged), and the
  anonymous gate + 403.
* README: the archive-upload section (formats, naming rule, in-place
  replace, both new settings), the local-directory form removal noted,
  config reference rows for BOR_UPLOAD_DIR / BOR_UPLOAD_MAX_MB.

Gates: unit+integration green, app/ coverage 99%, the story E2E green
in isolation, the regression suites (git sources admin, local
directory sources, sync button, import documents, nav rename, smoke,
shared header) green in isolation, ruff + pyright clean.

Note: per this phase's file-level staging, frontend/assets/styles.css
also carries the small same-day in-flight owner rework already in the
working tree (the .sign-in-mobile companion rule for the phase-48
mobile sign-in copy); the phase-49 change is the upload form's block.
2026-08-28 15:57:59 -04:00
ducoterra 872a07cee7 feat(ui): rename nav items — "Sources" becomes "RAG", "Git sources" becomes "Sources"
Owner request (2026-08-28): the two admin-only nav items read like the
same thing, so they are relabeled — the document-catalog link
(#nav-sources, /sources.html) becomes "RAG" and the source-manager link
(#nav-git-sources, /git-sources.html) becomes "Sources".

Phase 48 (48_nav_rename_sources), label-only per the locked decision:
- all six pages (index, sources, git-sources, tuning, document, login):
  the two <a> texts swap; ids, hrefs, hidden defaults, is-active /
  aria-current placement, and nav order (Chat, RAG, Sources, Tuning)
  are byte-unchanged otherwise.
- header.js: comment/docstring label mentions only — the reveal-by-id
  logic is untouched (ship-hidden/reveal contract intact).
- test_git_sources_admin.py / test_mobile_hamburger_nav.py: the two
  suites that asserted the old label text are updated; comment-only
  label fixes in test_shared_header.py / test_nav_consistency.py.
- tests/e2e/test_nav_rename_sources.py: the story E2E (green in
  isolation) — renamed labels + unchanged hrefs/order/markers on all
  six pages, click navigation with the active marker, the anonymous
  ship-hidden contract, and regression guards for the untouched
  controls (#sync-label "Sync sources", viewer #doc-back "Sources").
- All eight surrounding header/nav suites stay green in isolation;
  unit+integration green, app/ coverage 99% (frontend-only change),
  ruff + pyright clean.

Note: per this phase file-level staging, the six page files and
header.js also carry the same-day in-flight owner rework that was
already in the working tree when phase 48 ran (mobile sign-in dropdown
copy, sync button ship-hidden on the Sources page); the label rename
itself is the two-text swap on each page.
2026-08-28 12:33:18 -04:00
ducoterra 03bead092c various fixes 2026-08-28 09:42:19 -04:00
ducoterra 5d679f5184 feat(import): index quadlet unit files and jinja templates (A9 revision)
Phase 47 (owner permission 2026-08-27, TODO.md L10–11, roadmap R1): the
full Podman quadlet family (.container, .network, .volume, .image,
.pod, .kube, .swap, .os, .endpoint) and .j2 Jinja templates join the
allowed + default A9 import formats, chunked as plain text (owner
decision — no TOML/Jinja-aware splitter). No env configuration needed:
a default import now indexes them.

- app/config.py: _ALLOWED_IMPORT_EXTENSIONS + the default
  import_extensions CSV gain the ten names (the original seven first);
  the never-widen BOR_IMPORT_EXTENSIONS validator is untouched and
  still rejects truly unknown extensions.
- app/rag/chunker.py: ten _FORMAT_CHUNKERS entries -> chunk_text
  (HARD_MAX_CHARS 1200 honored, unknown-suffix fallback unchanged);
  docstring/comments cite the A9 revision 2026-08-27.
- tests/fixtures/docs/homelab/: quadlet/compose.container (realistic
  quadlet TOML, >1500 chars, [Unit]/[Service]/[Container] sections,
  RESE-QUADLET-SENTINEL-77aa), quadlet/lan.network,
  quadlet/cache.volume, templates/deploy.j2 (for/set/if Jinja
  constructs + RESE-JINJA-SENTINEL-33dd). Every suite that seeds the
  fixture tree updates its 9 -> 13 document-count constants.
- tests/unit/test_config.py: allowed set carries all seventeen formats,
  default CSV + dotted import_extension_set include the ten, the
  validator accepts the new names and still rejects unknowns.
- tests/unit/test_chunker.py: dispatch parity with chunk_text for every
  new suffix (parametrized), the .container fixture chunks >=2 under
  the cap with the sentinel surviving, the .j2 fixture keeps {{ }}
  verbatim, the unknown-suffix fallback is unchanged.
- tests/unit/test_importer.py: a default-extensions walk over a temp
  tree indexes exactly the ten new files (unknown/hidden/excluded
  filtered), the original seven still walk, stem-title fallback holds.
- tests/integration/test_import_quadlet_jinja.py (new): import_sources
  over a temp tree with .container/.volume/.j2 -> documents + chunks
  rows with stem titles; delta re-import updates only the changed .j2
  doc; prune drops the deleted .volume doc with cascade.
- tests/e2e/test_quadlet_jinja_import.py (new, story suite, mock-only,
  isolation): GET /api/docs (admin session) lists the four new-format
  docs with non-zero chunk counts and stem titles; the Sources table
  renders a row + .doc-link per file; the phase-26 modal shows the
  .container TOML ([Container] section + sentinel) with stem title and
  the container format badge; a RESE-JINJA-SENTINEL-33dd question
  FTS-matches the .j2 chunk -> honest-positive (A8: LOW requires zero
  FTS hits) — the bubble is not .is-deflected and a source chip names
  templates/deploy.j2.
- README.md + .env.example: the extended default format set (A9
  revised 2026-08-27, plain-text chunking, narrow-only rule intact).
- .agent/PLAN.md: the A9 revision (owner-locked R1) — A9 row status,
  the revision note under the anchors table, and the §5 chunking-policy
  + §11 workflow lines. The only PLAN edit this phase.

Gates: uv run pytest 795 passed; app/ coverage TOTAL 99% (>90%);
ruff check + pyright clean; story E2E 4/4 in isolation (DB up);
regression E2E suites test_import_documents (3) / test_sync_button
(3) / test_git_sources_admin (6) green in isolation.

Also records the 47_quadlet_jinja_import task-file moves (01–03)
todo/ -> complete/.
2026-08-28 07:02:24 -04:00
ducoterra 6be692d999 feat(header): hamburger dropdown nav on mobile (owner permission)
TODO.md L9 (owner permission 2026-08-27, roadmap A5): "The navbar on
mobile is way too squished. Make it a hamburger dropdown menu with a
nice animation." At <=640px the nav links leave the bar — a 44px
#nav-toggle opens #app-nav as an animated (180ms slide+fade)
edge-to-edge dropdown with comfortable rows and the auth visibility
contract intact inside the menu; at >640px the bar is byte-identical
to pre-phase-46 (hamburger absent, inline pills as before).

- frontend/*.html (all six pages): the shared bar gains the
  #nav-toggle button (type=button, aria-expanded=false,
  aria-controls="app-nav", aria-label="Menu", aria-hidden 3-line
  SVG icon) immediately before the nav, and the nav gains
  id="app-nav" — one <nav>, no duplicated links, so the whoami reveal
  works inside the menu unchanged (phase-34 same-bar contract intact).
- frontend/assets/styles.css: .nav-toggle is display:none outside media
  queries (desktop untouched); the <=640px block adds the 44px toggle
  (+hover in the .steering-toggle:hover family, sized 20px icon), turns
  .app-nav into the dropdown (absolute top:100% edge-to-edge under the
  sticky header, surface + hairline + --shadow-lg, z-index 21 =
  header+1, closed state invisible + non-interactive with the 180ms
  opacity/transform/visibility-delayed pair, .is-open the only
  opener), and comfortable 1rem/0.75rem menu rows — superseding the
  phase-34/35 pill-squeeze rules for .nav-link/.app-nav (the 900px
  tablet block, action pills, and 58px bar height untouched). The
  reduced-motion block stills BOTH the closed and .is-open states: the
  .is-open rule (0,2,0) out-specifies a bare .app-nav (0,1,0), so the
  override must name both — verified live in Chromium (task 03).
- frontend/assets/header.js: ONE module-owned binding (import-time,
  null-safe like the sign-out binding): click toggles .is-open +
  aria-expanded in sync, a delegated nav-link click closes, Esc closes
  and refocuses the toggle, and matchMedia("(max-width: 640px)")
  change drops the state on resize back to desktop. The binding
  touches only the container — ship-hidden whoami links stay hidden.
- tests/unit/test_hamburger_nav.py (new): the markup/CSS/JS contract
  pins (six identical toggles in the shared row, desktop byte-
  identical, dropdown + .is-open + 180ms + reduced-motion rules, the
  superseded squeeze rules gone, the one-binding behavior).
- tests/e2e/test_shared_header.py: assert_shared_bar gains mobile=True
  (at <=640px the bar shows the hamburger + the closed nav; the
  per-role menu contents are pinned by the story suite).
- tests/e2e/test_mobile_hamburger_nav.py (new, story suite, 375x812):
  toggle is a visible >=44px target, menu closed (opacity 0 /
  visibility hidden), no horizontal overflow; anonymous menu shows
  exactly "Chat" (admin-only links stay hidden inside); admin menu
  shows all four links (whoami reveal inside the menu); a link click
  navigates + the arrival page ships closed; Esc closes and refocuses
  the toggle (outside click does NOT close — accepted: the locked
  close set is Esc + link + resize, no backdrop); the 180ms
  opacity/transform pair is live and reducedMotion:reduce stills both
  states with open/close still working; 1280x800 regression — toggle
  display:none, all four inline links inside the header band.

Gates: unit+integration 773 passed; app/ coverage TOTAL 99%
(unchanged — frontend-only phase); story E2E 7 passed in isolation
(mock LLM, DB up); regression suites test_nav_consistency (6) /
test_header_consistency (3) / test_shared_header (6) /
test_responsive_polish (7) / test_tuning_nav_link (4) all pass in
isolation; ruff check + pyright clean. A11 honored: no CDN, no new
assets.

Also records the 46_mobile_hamburger_nav todo/ -> complete/ move.
2026-08-28 06:07:02 -04:00
ducoterra b855d0aef9 feat(rag): unbounded agent tool calls behind a round cap (owner revision)
Phase 45 (owner permission 2026-08-27, TODO.md L8: "allow the LLM
to make as many tool calls as it wants"): the phase-37 per-turn tool
budgets (BOR_AGENT_LIST_CALLS / BOR_AGENT_READ_CALLS, default 1 each)
and their exhaustion refusals are removed — a grounded turn now offers
list_documents / read_document for the whole turn (re-lists included),
bounded only by the round cap:

- app/config.py: agent_max_rounds (BOR_AGENT_MAX_ROUNDS, default 10,
  negative rejected) replaces agent_list_calls / agent_read_calls;
  .env.example + README document the single knob; app/rag/prompts.py
  docstrings follow.
- app/rag/agent.py: the loop runs tools until the model answers or
  rounds >= max_rounds, at which point it forces one final no-tools
  answer (the cap is the only forced exit); 0 = no tools — exactly one
  tools=None request, byte-identical to the pre-phase-37 path (the
  kill switch). Rejected calls (unknown tool / missing args /
  already-in-context / unknown path) still consume a round, so
  pathological rejected-call streams are bounded by the cap. The
  per-call log line is now tool/args/round=N/M; the per-turn
  tool_calls=N field and the tool SSE event are unchanged.
- tests/e2e/mock_llm.py: MULTI_READ_TRIGGER ("read two documents") —
  the deterministic list -> read #1 -> read #2 -> forced-answer flow
  (byte-stable "I read <sp1> and <sp2>." line), classified by the
  count of tool-role read results; the phase-37 single-read flow stays
  byte-identical (unit-pinned in tests/unit/test_mock_tool_flow.py).
- tests/e2e/test_agent_unlimited_tools.py (new, story suite,
  mock-only): three tool frames/lines in order (one list, two reads —
  the second read is what the old read budget refused) + the
  both-named non-deflected answer; done.sources + chips = retrieval
  doc + both reads, deduped; no budget refusal rendered; the
  single-read marker flow regression (exactly one read, single tool
  pair).
- .agent/PLAN.md: the phase-45 SSE revision note (owner-locked, R2) —
  the only PLAN edit this phase; the phase-37 note's budget clause is
  marked removed.

Unit/integration rewrites (test_agent.py round-cap matrix incl. the
kill switch and rejected-call spam, test_config.py, test_chat_api.py
agent_max_rounds=0 fixtures) landed with the server core so every gate
stays green.

uv run pytest: 756 passed, app/ coverage 99%; ruff + pyright clean;
story E2E 4/4 in isolation (ran twice); regression E2E suites
(agent_document_tools unmodified, chat_rag, smoke) green in isolation.

Also records the 45_agent_unlimited_tools todo/ -> complete/ task-file
moves (00/01/02 pending in the working tree, task 03 moves on success).
2026-08-28 04:50:56 -04:00
ducoterra bc70ce36e0 feat(chat): render markdown tables in answers, viewer, and thinking
GFM pipe tables in the shared renderer (TODO.md L6): a table-protection
pass in frontend/assets/markdown.js (fences -> tables -> escape order)
pulls each header+separator+body block out as a placeholder, renders
cells escape-first with the same inline transforms, and reinserts a
semantic <table class="md-table"> inside a horizontal-overflow
.md-table-wrap — so a pipe table in a chat answer, the document
viewer/modal, and the thinking block all render the same semantic
table. Fences win over tables; lone pipes stay text.

- styles.css: .md-table palette rules (PLAN §7.2 tokens, no motion);
  min-width: max-content so a WIDE table keeps its natural width and
  the wrapper is the real scroller (width:100% alone wrapped the wide
  table's cells — proven by the new E2E).
- mock_llm.py: TABLE_TRIGGER ("show me a table") -> byte-stable
  TABLE_ANSWER (3-column table, <img onerror> XSS probe line, wide
  5-column table), checked before DEFLECT_MODE like SUMMARY_MODE.
- tests/fixtures/docs/homelab/tables.md: 3x3 pipe table + pipe-heavy
  fenced block (viewer/fence subject); the shared fixture set grows
  8 -> 9 docs, so every suite pinning the count (added/formats/
  stat-docs/EXPECTED_ROWS) is updated accordingly.
- tests/e2e/test_markdown_tables.py (new, story suite): chat table
  shape + non-deflection, wide-table wrapper scroll (no page
  overflow), XSS probe inert, viewer modal table, fence-not-a-table,
  lone pipe stays text.
- tests/e2e/test_agent_document_tools.py: fix a pre-existing flake —
  the "Calling tool…" label window is ~0.4 s at the mock's 0.1 s
  tool-frame pacing, and a polling expect could stride over it
  (failed 3 of 5 runs on the committed baseline). The pre-submit
  MutationObserver record is the deterministic source of truth; the
  racy to_have_text gate is gone.

uv run pytest: 738 passed, app/ coverage 99% (TOTAL unchanged);
ruff + pyright clean; story E2E 6/6 in isolation; regression E2E
suites (chat_rag, document_viewer, document_summaries, smoke) green.
2026-08-28 03:35:50 -04:00
ducoterra 27b7cb96d5 feat(chat): thinking window scrolls again, follows the tail only while pinned
TODO.md L7: "Add scrolling back to the thinking block, but have it
autoscroll while thinking content is generating." Owner direction
2026-08-27 (roadmap A2) reverses the phase-21 no-scroll choice
(2026-08-24): details.thinking .thinking-text is user-scrollable again
(overflow-y: auto — the 320px clip stays, owner-confirmed), and the
phase-17 per-chunk bottom-pin is GATED: the window follows the live
tail only while the user is pinned near its bottom (THINKING_NEAR_
BOTTOM_PX = 32); scrolling up pauses the follow, returning to the
bottom re-arms it on the next chunk (the gate re-runs on every frame).

- frontend/assets/styles.css: .thinking-text overflow-y: hidden ->
  auto; the phase-21 owner-choice comment is replaced with the
  2026-08-27 direction; max-height: 320px and every other declaration
  in the rule byte-identical.
- frontend/assets/app.js: export const THINKING_NEAR_BOTTOM_PX = 32 +
  isThinkingNearBottom(textEl) (scrollHeight - scrollTop -
  clientHeight <= band); the thinking-handler pin becomes
  `if (block.open && isThinkingNearBottom(textEl))` — a scrolled-up
  reader is never re-pinned and a closed (restored) block is never
  pinned; everything else in the handler (and phase 42's no page
  scroll) untouched.
- tests/unit/test_thinking_scroll.py (new, replaces the deleted
  tests/unit/test_thinking_no_scroll.py): pins the CSS contract (auto
  + 320px + owner-direction comment, no hidden/scroll left), the
  exported 32px band, the gate math, the gated pin (no unconditional
  `if (block.open)` remains), and the surviving collapsed-restore pin.
- tests/e2e/test_thinking_scroll.py (new, mock-only, replaces the
  deleted tests/e2e/test_thinking_no_scroll.py — its pins asserted the
  reversed phase-21 behavior, so both phase-21 files are deleted in
  this commit): user scroll restored on the frozen 4s-hesitation tail
  (wheel is 1:1; click+Home keyboard — the plain div is not
  keyboard-focusable by design, tabindex is test scaffolding; the
  literal drag holds the user's position — headless Chromium's
  overlay scrollbars are not grabbable by synthetic mouse events,
  documented in the suite), follow-while-pinned at the 2nd-to-last
  and last chunk (±1px) with the last chunk's text inside the visible
  rectangle, no re-pin over ≥5 mid-stream chunks after a
  half-window scroll-up, re-pin on the next chunk after returning to
  the bottom, the CSS contract, plus the phase-11 (long answer: page
  scrolls, bubble overflow untouched) and phase-17 (restored
  collapsed block with full text) regressions.
- tests/unit/test_chat_persistence.py: the CSS pin flips with the
  contract (auto in, hidden out — owner direction 2026-08-27).
- tests/unit/test_frontend_scroll.py: the "page-level band constant is
  gone" pin now excludes the phase-43 window-level
  THINKING_NEAR_BOTTOM_PX (a different band — the window's, not the
  page's).

E2E (isolation): test_thinking_scroll 7/7 (twice); regressions
test_thinking_display 5/5, test_chat_persistence 4/4,
test_no_reply_autoscroll 5/5, test_smoke 3/3; unit+integration 725
passed, app/ coverage 99% (unchanged — frontend-only phase);
ruff + pyright clean.
2026-08-28 01:36:32 -04:00
ducoterra 7c6763319b fix(chat): stop autoscrolling while a reply streams (owner direction)
TODO.md L5: "Get rid of the chat reply autoscroll, it's breaking things
like making it impossible for the user to scroll while a reply
generates." Owner direction 2026-08-27 (roadmap A1) revises the
phase-18 follow-the-bottom choice: the page NEVER auto-scrolls while a
turn streams. Kept (owner decision): the submit reveal (the user's own
message) and the one-shot phase-14 restore landing.

- frontend/assets/app.js: delete NEAR_BOTTOM_PX + isNearBottom;
  scrollReveal becomes the one unconditional scrollIntoView (still
  smooth, still "auto" under prefers-reduced-motion via SCROLL);
  addMessage(who, html, scroll = false) carries an explicit scroll
  intent — only the submit (", true") and the two restore landings
  scroll. The thinking/tool/delta handlers and the typing indicator
  drop their page-scroll calls; the thinking block's INTERNAL
  bottom-pin (textEl.scrollTop, phase 17 — reworked separately in
  phase 43) and the turn-end focus({ preventScroll: true }) survive.
- tests/unit/test_frontend_scroll.py: rewritten pin for the new
  contract — phase-18 gate absent, helper unconditional, explicit
  intent at submit/restore, no page-scroll call in the streaming
  handlers, typing bubble scroll-free, SCROLL reduced-motion intact.
- tests/unit/test_chat_persistence.py: restore-landing pin updated to
  the new signature (the old forced "auto" is gone; the landing
  rides the default SCROLL — noted at the call site).
- tests/e2e/test_no_reply_autoscroll.py (new, replaces the deleted
  test_follow_bottom_scroll.py): no autoscroll across >=10 samples
  (1px tolerance) during a long answer and during the thinking stream;
  submit-from-the-top still reveals the user message; the restore
  landing lands one-shot on the latest message and stays; long answer
  + sources and the collapsed thinking block persist and restore.

E2E (isolation): test_no_reply_autoscroll.py 5/5; regressions
test_chat_rag 3/3, test_thinking_display 5/5,
test_chat_persistence 4/4, test_long_answers 2/2, test_smoke 3/3;
unit+integration 723 passed, app/ coverage 99%; ruff + pyright clean.
2026-08-28 00:29:25 -04:00
ducoterra 6cf1df9bf2 feat(sync): fail fast with a modal when a model is unavailable
TODO.md L4: with a dead model endpoint the sync discovered it only
mid-import, after slow clones — and a tooltip on the button is not a
readable error.

- app/rag/llm.py: ModelUnavailableError + check_models(llm) — a tiny
  pre-sync probe (one short embedding + one 1-token-scale completion)
  that fails naming the unavailable model (embed first, then the
  summary model); the sync sanitizer still masks credentials.
- app/api/sync.py: the probe is step 1 of _run_sync — before source
  resolution and before any clone_or_pull; a model failure is just
  another 'failed' state (no new endpoint, A10/A12 untouched).
- frontend/assets/header.js: applySyncFailure now also opens the
  module-owned error modal (every page carrying #sync-btn, zero
  page-markup changes): lazily built backdrop + role=alertdialog
  panel, error text via textContent, close via button / Esc /
  backdrop, focus in-and-out to #sync-btn (with a body→#sync-btn
  fallback — the run's disabled button drops focus to <body>).
- frontend/assets/styles.css: the modal on the phase-08 error palette
  (z-index above the header, .is-open open/close, reduced-motion
  stilling, 44px close target).
- Tests: probe unit tests (both up / embed down / summary down /
  custom model names), sync integration (fail-fast before any clone,
  probe-before-effective_sources ordering, credential masking,
  healthy regression), the phase-41 source pins, and the story E2E
  (two module apps on distinct ports — dead endpoint on a closed
  loopback port vs session mock: ≤10 s fail-fast + modal contract,
  all three dismissal paths with focus out to #sync-btn, button
  title/.is-error + Sources banner untouched, healthy phase-32
  lifecycle regression to 'Synced HH:MM').

E2E (isolation): test_sync_model_down.py 4/4, test_sync_button.py
3/3, test_git_sources_admin.py 6/6, test_local_directory_sources.py
3/3; unit+integration 721 passed, app/ coverage 99%; ruff + pyright
clean.
2026-08-27 23:44:35 -04:00
ducoterra 6f9e033117 fix(header): ship the tuning toggle hidden — no anonymous flash
#steering-toggle (the header 'Tuning' button) shipped visible in all
six pages and was only removed after /api/whoami resolved, so
anonymous visitors saw it flash for the whole round-trip (TODO.md L3).
It now ships hidden on every page and initSharedHeader unhides it only
for admin — the same ship-hidden / reveal-for-admin contract as the
admin-only nav links; the anonymous end-state (removed from the DOM,
phase-16 'absent, not hidden') is unchanged.

Adds the story E2E suite (MutationObserver proves zero visible frames
for anonymous on every page, admin reveal + panel + count badge,
nav-contract regression) and the source-level unit pins. Also fixes
test_steering.py's BASE_SCRIPT_COUNT (2 → 3: brand.js + markdown.js +
app.js, since phase 39).
2026-08-27 22:38:58 -04:00
ducoterra fe55be0c35 feat(brand): configurable app name — BOR_APP_NAME drives /api/config + the frontend brand layer
Build and Push Containers / build-and-push (push) Successful in 1m50s
One env var (BOR_APP_NAME, default "Brain of Reese") now drives the app's
display name everywhere (TODO.md L12 — owner ask: "a way to customize the
name for 'Brain of'. Should be an env var."). The existing app_name setting
is the source of truth (phase locked decision — no new variable, no rename);
with the variable unset the app is byte-identical to before.

Endpoint (A10 public/stateless, no secrets):
  GET /api/config → exactly {app_name, version} (app/api/config.py, the
  health.py pattern; registered before the static mount). Integration tests:
  anonymous 200, default values, a Settings override follows, key set is
  exactly two keys — no other setting may leak in later.

Frontend brand layer (A11 — runtime fetch, static templates stay static):
  assets/brand.js — a CLASSIC script, first on all six pages, so its top
  level runs at parse time: window.BOR_BRAND = "Brain of Reese"
  synchronously (the default renders immediately, no blank flash), then a
  no-store fetch of /api/config applies the name — document.title (global
  replace), every .brand-text (a name starting "Brain of " keeps the bold
  split Brain of <strong>rest</strong>, any other name renders plain; the
  operator-controlled name is HTML-escaped before innerHTML), a TreeWalker
  over text nodes (script/style rejected — page source never rewritten),
  and the aria-label/placeholder/meta-content attributes. Fetch failure
  keeps the default + console.warn (the loadHealth house style).
  app.js (status labels, typing label, elapsed-hint aria, tool labels) and
  document.js (viewer titles) read window.BOR_BRAND at CALL time via
  brand() — a label set after the fetch lands carries the configured name.
  Containerfile: esbuild minify line for brand.js (classic, like markdown.js);
  the phase-33 ?v= cache-busting picks the new asset ref up automatically.

E2E (A16 — one story, one file, isolated): test_configurable_brand.py boots
a SECOND app instance (same DB/mock-LLM/admin-auth env block, port APP_PORT+1,
BOR_APP_NAME="Brain of Testy") — the shared conftest server keeps the
default name so every other suite's title/label assertions stay untouched —
and asserts /api/config on both instances, the index title/brand/greeting/
#messages aria-label, the sources + login page titles, and one pre-token
chat turn (think out loud marker) whose #send-status reads "Brain of Testy
is thinking"; the no-op regression pins the shared server's default bytes.

Docs: .env.example App section + README configuration reference — what it
affects (titles, header brand, status labels, aria text), the default, the
bold-split rendering rule.

Gates: 695 unit+integration passed, app/ coverage 99% (>90%), story E2E
green in isolation (two consecutive runs), brand-string suites (smoke,
shared header, header consistency, chat persistence) green, ruff + pyright
clean.
2026-08-27 02:24:16 -04:00
ducoterra 94d7228510 feat(admin): local directory sources — kind/path on git_sources, combined sync + import, page form + badges
An existing, non-git directory is now a first-class source alongside
the git repos: one table (git_sources + kind discriminator — A13
reversible migration), one admin page, one Sync button (phase locked
decisions; the phase-35 table is extended, not duplicated). The DB is
the local-source registry — no env var for local paths;
BOR_GIT_SOURCES stays a git-only empty-table fallback.

Migration 0007 (reversible, up/down integration-tested):
git_sources.kind TEXT NOT NULL DEFAULT 'git' + ck_git_sources_kind
(kind IN ('git','local')); git_sources.path TEXT NULL +
uq_git_sources_path (mirrors 0006's uq_git_sources_url). Existing rows
read kind='git', path=NULL.

API (phase-35 contract extended, git byte-identical): POST kind=local
requires path — trimmed, ~-expanded, absolute + an existing server
directory, else 422 naming the path (fail loud at add-time); duplicate
path 409 (named); wrong field combos 422. GET rows carry kind + path
(git and env rows: path null); anonymous still 403 on every route (A10).

Sync + import_docs resolve DB git + local rows together: git →
clone_or_pull (unchanged); local → re-verified .is_dir() AT SYNC TIME
(it may have moved/deleted since add-time) — a missing dir raises
"local source missing: <path>" (sanitized) before anything imports;
one import_sources(..., prune=True) over the single combined list
(pruning covers the union). Both-empty fails loudly ("no sources
configured (git or local)"); --source still wins; the env fallback
stays git-only.

Page: second "Add a local directory" form (the same §7.4 never-stale
button + inline-error lifecycle as the git form; 422/409 details name
the path), Git/Local badges on rows (text + color, never color alone —
WCAG), updated hint (git + local together, union prune); the
anonymous sign-in gate is unchanged.

Tests: 0007 up/down; the API local-kind matrix (403/201/422/409) with
the git-kind suite green unchanged; the sync pipeline local/git/
mixed/missing against a host temp dir (the KB actually updated);
import_docs DB resolution + --source precedence. Story E2E (isolated,
deterministic across runs): add (Local badge) → missing path inline
422 naming it / duplicate 409 → the real Sync button imports the
fixture file (GET /api/docs + sentinel in its content) → file deleted
+ sync prunes it (union prune) → row removed; anonymous gate + 403s
(phase-35 regression). test_git_sources_admin.py (phase 35) green
UNCHANGED — no selector collision with the new form;
test_sync_button.py green.

Docs: README — the two managed kinds (git = clone/pull mirror; local =
direct in-place walk), add-time validation, union pruning, "the DB is
the local-source registry (no env var for local paths)";
.env.example — the env fallback is git-only.
2026-08-27 01:04:16 -04:00
ducoterra 15c1272828 feat(rag): agent document tools — list/read tools with env-tuned budgets, SSE tool events + "calling tool" UI
Grounded chat turns now run the agent loop (app/rag/agent.py) instead
of a bare chat_stream: while the per-turn budgets last
(BOR_AGENT_LIST_CALLS / BOR_AGENT_READ_CALLS, default 1 each) the model
gets list_documents (the indexed catalog, /api/docs order) and
read_document (full text, never truncated — A7-revised contract); once
both budgets are spent the tools key is dropped from the request and
the model must answer. Rejected calls (unknown tool, unknown/missing
path, document already in context, spent budget) consume no budget.
Budgets 0/0 make exactly one tools=None request — byte-identical to
the pre-phase path (budgets-as-kill-switch). Deflected turns keep the
direct chat_stream (A8 unchanged; the LOW prompt never carries the
<tools> section).

SSE contract gains {"type":"tool","name":...,"argument":
"source/path"|null} frames ahead of the answer deltas (PLAN §4
extension, owner permission 2026-08-26); done.sources, query_log.sources
and the per-turn log line (gains tool_calls=N) report the retrieval
docs + read docs, deduped. The UI shows a "calling tool"
button/label state and one visible .tool-call line per call above the
answer; the lines persist with the chat record and re-render on
reload. chat_stream passes tools through and accumulates streaming
tool_calls deltas into ToolCallPiece (tools=None stays byte-identical).

E2E: deterministic mock tool flow ("use your tools" + <tools> marker:
list -> read first catalog line -> quoted answer) plus the story suite
(marker flow, reload re-render, plain/deflected no-tool regressions).
Docs: .env.example + README (the two tools, the budgets, the SSE tool
frame, the "calling tool" UI state).

probe: turbo tool_calls=supported 2026-08-26 (uv run python -m
scripts.llm_probe --tools — non-streaming + streaming
finish_reason=tool_calls, indexed delta.tool_calls partials)
2026-08-26 22:39:14 -04:00
ducoterra 9efffcb428 feat(viewer): show document summary together with the original (TODO.md L5) 2026-08-26 19:11:15 -04:00
ducoterra 1925bb66a8 feat(sources): admin page to add and remove git sources (TODO.md L4) 2026-08-26 18:42:28 -04:00
ducoterra b2d8696741 feat(ui): one consistent navbar on every page (TODO.md L3) 2026-08-26 15:39:42 -04:00
ducoterra 8fabb7efda perf(ui): cache busting — HTML no-cache + versioned asset URLs (?v=) with immutable 1y asset caching
Phase 33 (story: .agent/user_stories/cache-busting.md).

- app/core/caching.py: asset_version() — git short SHA (a commit is a
  deploy), stable content-hash fallback for non-git checkouts, "dev"
  for a missing static dir; computed once per process. CachingMiddleware
  — the five HTML pages revalidate (no-cache) with ?v=<token> asset refs
  rewritten in flight; /assets/* is public, max-age=31536000, immutable;
  everything else (all /api/*, the SSE chat stream in particular) passes
  through byte-identical.
- tests/e2e/test_cache_busting.py: fresh-Chromium wire assertions —
  document no-cache, versioned CSS/JS request URLs sharing one token,
  immutable asset headers, /api/health baseline headers, SSE chat to
  done (mock LLM).
- README 'Caching / deploys' section + story file.

Also fixed two prod-image defects surfaced by this phase's podman smoke
(the full app would not boot):
- Containerfile: ship the scripts/ package — app/api/sync.py (phase 32)
  imports scripts.git_sync / scripts.import_docs at module level, so the
  container crashed on boot (ModuleNotFoundError: No module named
  'scripts').
- compose.yaml: pass BOR_ADMIN_PASSWORD / BOR_SESSION_SECRET through to
  the app service (:- defaults keep 'podman compose up -d db' working;
  the app's own fail-loud gate still names missing admin auth).

Smoke: podman compose --profile prod up -d on a fresh image + a fresh
Chromium profile — /, /sources.html and /login.html all served
Cache-Control: no-cache; all 8 asset requests versioned with one shared
token (content-hash fallback inside the image — no .git there);
/assets/* immutable for a year.
2026-08-25 22:42:10 -04:00
ducoterra 52136fe307 feat(admin): one-click sources sync — admin-only button triggers git clone/pull + re-import + KB overview refresh with polled live status 2026-08-25 21:39:38 -04:00
ducoterra 0654b304e1 feat(rag): lite-generated KB overview in the system prompt — stored single row, regenerated on import, <knowledge_base> section in HIGH+LOW prompts 2026-08-25 20:22:51 -04:00
ducoterra 572a4190a6 feat(rag): lite-model document summaries — non-markdown docs summarized at import, summary chunk retrieves and resolves to the full source doc 2026-08-25 17:48:37 -04:00
ducoterra 3841bd5a30 feat(ui): expose Global Tuning from Chat + Sources headers (admin-only Tuning nav link) 2026-08-25 14:51:16 -04:00
ducoterra 3d044f33a1 feat(rag): git-based import sources — BOR_GIT_SOURCES repos cloned (first run, --depth 1) or pulled (--ff-only) into BOR_SOURCES_DIR/<repo>/ then indexed; --source still wins; a failed sync aborts before importing anything 2026-08-25 14:23:02 -04:00