refactor(agents): migrate .agent/ planning tree to .agents/

Standardize on the .agents/ directory (shared with project skills):
phases/, user_stories/, reports/, screenshots/, validate.sh, and
phase-sessions/ + pipeline.log all move to .agents/ (git mv preserves
history; runtime artifacts move alongside).

Updates every reference in AGENTS.md, README.md, .gitignore, app
docstrings, and test story headers. Historical KB content in data/
and the runtime pipeline.log transcript are left untouched.

.agents/reports/06_story_loading_feedback.a1.md

@@ -0,0 +1,17 @@
+Phase 06 complete and committed (`e5810b0`).
+
+**Implemented**
+- `app.js`: single `setUiState(state)` state machine (`idle → thinking → streaming → done|error → idle`) driving typing indicator, button disabled/spinner/label, and `#send-status`; 10s elapsed-seconds aria-label hint; exported `TURN_TIMEOUT_MS = 120000` guard (cleared on first delta); error banner with actionable hint; reduced-motion-aware scrolling; ad-hoc `setBusy` removed
+- Server: `ChatErrorEvent` schema (exact `{type, detail}` SSE error wire shape) used in all 3 chat error branches; `embed_ms`/`total_ms` added to error-path logs (per-turn line already had both — confirmed)
+- Mock LLM: additive `POST /__shutdown__` hook; E2E `llm_down` fixture stops the mock and restores a fresh instance for later tests
+- Tests: SSE error-event serialization (unit + integration), frontend contract unit tests, `tests/e2e/test_loading_feedback.py` (5 tests: slow-think indicator, button machine, live streaming, reduced motion, LLM-down recovery)
+
+**Results**
+- `uv run ruff check .` → all checks passed; `uv run pyright` → 0 errors
+- `uv run pytest --cov=app --cov-report=term-missing` → 123 passed, coverage 99% (>90% gate)
+- `uv run pytest tests/e2e/test_loading_feedback.py -v --no-cov` → 5 passed in isolation
+- Regression check: all 5 prior story E2E suites re-run in isolation → 16 passed
+
+**Decisions**: no CSS changes needed (tokens + reduced-motion fallbacks already met spec); error→idle settles in the turn handler's `finally` so the banner persists while the button always recovers; committed only phase-06 files (`.agents/` file moves are harness-managed; the unrecorded phase-05 move predates this phase).
+
+**Next pending phase**: `.agents/phases/todo/07_story_responsive_polish.md`