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phase: 127_sync_incremental_folder_summaries
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All verified green — the previous rejection was a harness interruption (no code failure), and the working tree + doc fixes are intact.

**Phase 127 — final verification pass: 100% green** (all 4 tasks already complete; no code changes needed this pass)

- **Re-verified implementation:** `ImportSummary.changed_paths` at all 5 increment sites + `_prune`; `affected_folder_keys` + `generate_folder_summaries(changed_docs=…)` (restricted keys, prune pass both modes, hook total = affected count); sync changed-KB branch passes `changed_docs=summary.changed_paths`; CLI keeps full-regen contract
- **Tests:** `uv run pytest --cov=app --cov-report=term-missing` → **3022 passed**, `app/` coverage **99%**; `uv run pytest tests/e2e/test_incremental_folder_summaries.py -v --no-cov` → **3 passed in isolation**; `uv run ruff check . && uv run pyright` → clean, **0 errors**
- **Completion criteria:** one-file change rewrites only its folder chain (E2E pins siblings byte-identical, text AND `updated_at`) ✅; coverage >90% ✅; isolated E2E green ✅; no completed-phase behavior change (full suite green) ✅; atomic commit — delegated to the harness per pass rules (no git commands run by me)
- **Docs:** README.md re-checked — all 7 previous-pass fixes still in place (Theme page row, drill-down `ls` + capped `read`, phase-124 answer images section + `BOR_ANSWER_IMAGES`, markdown-included summaries, 17-color palette, folder summaries in `BOR_LLM_SUMMARY_MODEL`, CLI regen note); AGENTS.md verified consistent — no changes needed
- **Deviations:** none; untracked owner file `NOTES.md` left untouched (rides in the harness commit)
- **Next pending phase:** `128_sync_label_mobile`
This commit is contained in:
ducoterra
2026-09-27 21:12:25 -04:00
parent f50d4c8bc3
commit 6e654df387
38 changed files with 2741 additions and 46 deletions
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All verification complete. Final report:
**Phase 127 — final verification pass: all green** (all 4 tasks were already in `complete/`; no code changes were needed this pass)
- **Verified implementation:** `ImportSummary.changed_paths` recorded at all 5 added/updated sites + `_prune` (before delete, guards intact); `affected_folder_keys` + `generate_folder_summaries(changed_docs=…)` (restricted keys = candidates ∩ affected, prune pass both modes, hook total = affected count); sync's changed-KB branch passes `changed_docs=summary.changed_paths` with the `changed=N` log line; CLI (`scripts/import_docs.py`) passes no change set — full-regen contract preserved
- **Tests:** `uv run pytest --cov=app --cov-report=term-missing` → **3022 passed**, `app/` coverage **99%** (>90% gate); `uv run pytest tests/e2e/test_incremental_folder_summaries.py -v --no-cov` → **3 passed in isolation**; `uv run ruff check . && uv run pyright` → clean, 0 errors
- **Completion criteria:** ① one-file change rewrites only the folder chain (E2E pins sibling rows byte-identical, text AND `updated_at`) ✅ ② coverage >90% ✅ ③ E2E isolated green ✅ ④ no completed-phase behavior change (full suite + first-sync full-regen E2E) ✅ ⑤ atomic commit — delegated to the harness per this pass's rules (I make no git changes)
- **Docs:** README.md — fixed 7 pre-existing inconsistencies: missing Theme row in the pages table; stale `ls` (now drill-down tree, phase 94) and `read` (now capped at `BOR_READ_MAX_CHARS`, phase 95) tool descriptions; missing phase-124 answer images (new section + `show_image` tool row + `BOR_ANSWER_IMAGES` env row); "Document summaries (non-markdown)" → all docs incl. markdown (phase 118); theme palette 8 → 17 colors (phases 92/93); `BOR_LLM_SUMMARY_MODEL` now names folder summaries; CLI section notes overview + folder-summary regen. AGENTS.md — verified consistent, no changes needed
- **Deviations:** none. Untracked pre-existing `NOTES.md` left untouched (owner's notes, will ride in the harness commit)
- **Next pending phase:** `128_sync_label_mobile`
.agents/reports/127_sync_incremental_folder_summaries/127_sync_incremental_folder_summaries__00_phase.a1.validate
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=============================== warnings summary ===============================
.venv/lib/python3.13/site-packages/fastapi/testclient.py:1
/var/home/ducoterra/Projects/Personal/brain_of_reese/.venv/lib/python3.13/site-packages/fastapi/testclient.py:1: StarletteDeprecationWarning: Using `httpx` with `starlette.testclient` is deprecated; install `httpx2` instead.
from starlette.testclient import TestClient as TestClient # noqa
-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
================================ tests coverage ================================
_______________ coverage: platform linux, python 3.13.13-final-0 _______________
Name Stmts Miss Cover
--------------------------------------------------
app/__init__.py 1 0 100%
app/api/__init__.py 0 0 100%
app/api/auth.py 52 0 100%
app/api/chat.py 262 1 99%
app/api/chat_images.py 50 0 100%
app/api/chats.py 110 0 100%
app/api/config.py 13 0 100%
app/api/doc_drafts.py 99 0 100%
app/api/docs.py 179 1 99%
app/api/git_sources.py 241 0 100%
app/api/health.py 10 0 100%
app/api/steering.py 42 0 100%
app/api/suggestions.py 33 0 100%
app/api/sync.py 139 0 100%
app/api/tokens.py 40 0 100%
app/api/ui_settings.py 55 0 100%
app/config.py 256 0 100%
app/core/__init__.py 0 0 100%
app/core/auth.py 45 0 100%
app/core/caching.py 124 0 100%
app/core/debugging.py 29 2 93%
app/core/docs_push.py 39 0 100%
app/core/errors.py 5 0 100%
app/core/logging.py 13 0 100%
app/core/rate_limit.py 44 0 100%
app/core/security_headers.py 20 0 100%
app/core/theming.py 38 0 100%
app/core/tokens.py 44 0 100%
app/db.py 22 0 100%
app/main.py 68 0 100%
app/models.py 132 0 100%
app/rag/__init__.py 0 0 100%
app/rag/agent.py 374 1 99%
app/rag/archive_upload.py 134 0 100%
app/rag/chunker.py 220 4 98%
app/rag/doc_dates.py 18 0 100%
app/rag/folder_summaries.py 134 0 100%
app/rag/git_sources.py 38 0 100%
app/rag/importer.py 571 9 98%
app/rag/llm.py 244 1 99%
app/rag/md_images.py 63 0 100%
app/rag/overview.py 71 0 100%
app/rag/pdf.py 81 0 100%
app/rag/prompts.py 144 0 100%
app/rag/retriever.py 248 3 99%
app/rag/scaffolding.py 55 0 100%
app/rag/source_removal.py 41 0 100%
app/rag/sources_meta.py 16 0 100%
app/rag/suggestions.py 27 0 100%
app/rag/summarizer.py 49 0 100%
app/schemas.py 400 0 100%
--------------------------------------------------
TOTAL 5133 22 99%
coverage gate: app/ 99% (>90%) OK
All checks passed!
0 errors, 0 warnings, 0 informations
WARNING: there is a new pyright version available (v1.1.411 -> v1.1.414).
Please install the new version or set PYRIGHT_PYTHON_FORCE_VERSION to `latest`
validation OK
.agents/reports/127_sync_incremental_folder_summaries/127_sync_incremental_folder_summaries__00_phase.a2.err
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All verified green — the previous rejection was a harness interruption (no code failure), and the working tree + doc fixes are intact.
**Phase 127 — final verification pass: 100% green** (all 4 tasks already complete; no code changes needed this pass)
- **Re-verified implementation:** `ImportSummary.changed_paths` at all 5 increment sites + `_prune`; `affected_folder_keys` + `generate_folder_summaries(changed_docs=…)` (restricted keys, prune pass both modes, hook total = affected count); sync changed-KB branch passes `changed_docs=summary.changed_paths`; CLI keeps full-regen contract
- **Tests:** `uv run pytest --cov=app --cov-report=term-missing` → **3022 passed**, `app/` coverage **99%**; `uv run pytest tests/e2e/test_incremental_folder_summaries.py -v --no-cov` → **3 passed in isolation**; `uv run ruff check . && uv run pyright` → clean, **0 errors**
- **Completion criteria:** one-file change rewrites only its folder chain (E2E pins siblings byte-identical, text AND `updated_at`) ✅; coverage >90% ✅; isolated E2E green ✅; no completed-phase behavior change (full suite green) ✅; atomic commit — delegated to the harness per pass rules (no git commands run by me)
- **Docs:** README.md re-checked — all 7 previous-pass fixes still in place (Theme page row, drill-down `ls` + capped `read`, phase-124 answer images section + `BOR_ANSWER_IMAGES`, markdown-included summaries, 17-color palette, folder summaries in `BOR_LLM_SUMMARY_MODEL`, CLI regen note); AGENTS.md verified consistent — no changes needed
- **Deviations:** none; untracked owner file `NOTES.md` left untouched (rides in the harness commit)
- **Next pending phase:** `128_sync_label_mobile`
.agents/reports/127_sync_incremental_folder_summaries/127_sync_incremental_folder_summaries__00_phase.a2.validate
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=============================== warnings summary ===============================
.venv/lib/python3.13/site-packages/fastapi/testclient.py:1
/var/home/ducoterra/Projects/Personal/brain_of_reese/.venv/lib/python3.13/site-packages/fastapi/testclient.py:1: StarletteDeprecationWarning: Using `httpx` with `starlette.testclient` is deprecated; install `httpx2` instead.
from starlette.testclient import TestClient as TestClient # noqa
-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
================================ tests coverage ================================
_______________ coverage: platform linux, python 3.13.13-final-0 _______________
Name Stmts Miss Cover
--------------------------------------------------
app/__init__.py 1 0 100%
app/api/__init__.py 0 0 100%
app/api/auth.py 52 0 100%
app/api/chat.py 262 1 99%
app/api/chat_images.py 50 0 100%
app/api/chats.py 110 0 100%
app/api/config.py 13 0 100%
app/api/doc_drafts.py 99 0 100%
app/api/docs.py 179 1 99%
app/api/git_sources.py 241 0 100%
app/api/health.py 10 0 100%
app/api/steering.py 42 0 100%
app/api/suggestions.py 33 0 100%
app/api/sync.py 139 0 100%
app/api/tokens.py 40 0 100%
app/api/ui_settings.py 55 0 100%
app/config.py 256 0 100%
app/core/__init__.py 0 0 100%
app/core/auth.py 45 0 100%
app/core/caching.py 124 0 100%
app/core/debugging.py 29 2 93%
app/core/docs_push.py 39 0 100%
app/core/errors.py 5 0 100%
app/core/logging.py 13 0 100%
app/core/rate_limit.py 44 0 100%
app/core/security_headers.py 20 0 100%
app/core/theming.py 38 0 100%
app/core/tokens.py 44 0 100%
app/db.py 22 0 100%
app/main.py 68 0 100%
app/models.py 132 0 100%
app/rag/__init__.py 0 0 100%
app/rag/agent.py 374 1 99%
app/rag/archive_upload.py 134 0 100%
app/rag/chunker.py 220 4 98%
app/rag/doc_dates.py 18 0 100%
app/rag/folder_summaries.py 134 0 100%
app/rag/git_sources.py 38 0 100%
app/rag/importer.py 571 9 98%
app/rag/llm.py 244 1 99%
app/rag/md_images.py 63 0 100%
app/rag/overview.py 71 0 100%
app/rag/pdf.py 81 0 100%
app/rag/prompts.py 144 0 100%
app/rag/retriever.py 248 3 99%
app/rag/scaffolding.py 55 0 100%
app/rag/source_removal.py 41 0 100%
app/rag/sources_meta.py 16 0 100%
app/rag/suggestions.py 27 0 100%
app/rag/summarizer.py 49 0 100%
app/schemas.py 400 0 100%
--------------------------------------------------
TOTAL 5133 22 99%
coverage gate: app/ 99% (>90%) OK
All checks passed!
0 errors, 0 warnings, 0 informations
WARNING: there is a new pyright version available (v1.1.411 -> v1.1.414).
Please install the new version or set PYRIGHT_PYTHON_FORCE_VERSION to `latest`
validation OK
.agents/reports/127_sync_incremental_folder_summaries/127_sync_incremental_folder_summaries__01_importer_changed_paths.a1.err
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Everything is green. Final state verified:
- **`app/rag/importer.py`**: `ImportSummary.changed_paths` field (task-specified docstring, `field(default_factory=list)`); `changed_paths.append` beside **every** `added`/`updated` increment — all 9 sites across the 5 verb blocks (text, PDF, PDF-embedded image, image-context enrichment, standalone image) — and in `_prune` (new `summary: ImportSummary | None = None` param, appended before `session.delete`, only for docs actually deleted past both guards); only the `import_sources` call site updated; `log()` untouched.
- **`tests/unit/test_importer.py`**: 8 new tests — mixed 2-added/1-updated/1-pruned run with exact order + `len == added+updated+pruned`, unchanged re-run empty, backfill re-run empty, date-only re-run empty, changed image (added+updated sites), changed PDF (both sites), `_prune` with/without summary, and default-construction `== []`.
**Results:**
- `uv run pytest --cov=app --cov-report=term-missing` → 3005 passed, exit 0, TOTAL 99% (gate >90% ✅; `app/rag/importer.py` 98%, remaining misses pre-existing)
- `uv run ruff check .` → All checks passed
- `uv run pyright` → 0 errors (fixed two `# pyright: ignore[reportCallIssue]` placements)
- Grep audit: 9 increment sites ↔ 9 matching appends ✅
**Docs:** no doc impact (internal record-tracking only — no commands, config, env vars, or API surface changed; README/AGENTS.md untouched).
**Decisions:** appended right after each verb if/else (single line, same encounter order as the counter); enrichment path records `(source, image_doc.path)` since its docstring already states it fires the KB-change gate; PNG/PDF fixtures generated in-test with PyMuPDF (house no-binary-fixtures convention).
**Next pending task:** `02_folder_summaries_affected_mode.md`
.agents/reports/127_sync_incremental_folder_summaries/127_sync_incremental_folder_summaries__01_importer_changed_paths.a1.validate
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=============================== warnings summary ===============================
.venv/lib/python3.13/site-packages/fastapi/testclient.py:1
/var/home/ducoterra/Projects/Personal/brain_of_reese/.venv/lib/python3.13/site-packages/fastapi/testclient.py:1: StarletteDeprecationWarning: Using `httpx` with `starlette.testclient` is deprecated; install `httpx2` instead.
from starlette.testclient import TestClient as TestClient # noqa
-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
================================ tests coverage ================================
_______________ coverage: platform linux, python 3.13.13-final-0 _______________
Name Stmts Miss Cover
--------------------------------------------------
app/__init__.py 1 0 100%
app/api/__init__.py 0 0 100%
app/api/auth.py 52 0 100%
app/api/chat.py 262 1 99%
app/api/chat_images.py 50 0 100%
app/api/chats.py 110 0 100%
app/api/config.py 13 0 100%
app/api/doc_drafts.py 99 0 100%
app/api/docs.py 179 1 99%
app/api/git_sources.py 241 0 100%
app/api/health.py 10 0 100%
app/api/steering.py 42 0 100%
app/api/suggestions.py 33 0 100%
app/api/sync.py 139 0 100%
app/api/tokens.py 40 0 100%
app/api/ui_settings.py 55 0 100%
app/config.py 256 0 100%
app/core/__init__.py 0 0 100%
app/core/auth.py 45 0 100%
app/core/caching.py 124 0 100%
app/core/debugging.py 29 2 93%
app/core/docs_push.py 39 0 100%
app/core/errors.py 5 0 100%
app/core/logging.py 13 0 100%
app/core/rate_limit.py 44 0 100%
app/core/security_headers.py 20 0 100%
app/core/theming.py 38 0 100%
app/core/tokens.py 44 0 100%
app/db.py 22 0 100%
app/main.py 68 0 100%
app/models.py 132 0 100%
app/rag/__init__.py 0 0 100%
app/rag/agent.py 374 1 99%
app/rag/archive_upload.py 134 0 100%
app/rag/chunker.py 220 4 98%
app/rag/doc_dates.py 18 0 100%
app/rag/folder_summaries.py 123 0 100%
app/rag/git_sources.py 38 0 100%
app/rag/importer.py 571 9 98%
app/rag/llm.py 244 1 99%
app/rag/md_images.py 63 0 100%
app/rag/overview.py 71 0 100%
app/rag/pdf.py 81 0 100%
app/rag/prompts.py 144 0 100%
app/rag/retriever.py 248 3 99%
app/rag/scaffolding.py 55 0 100%
app/rag/source_removal.py 41 0 100%
app/rag/sources_meta.py 16 0 100%
app/rag/suggestions.py 27 0 100%
app/rag/summarizer.py 49 0 100%
app/schemas.py 400 0 100%
--------------------------------------------------
TOTAL 5122 22 99%
coverage gate: app/ 99% (>90%) OK
All checks passed!
0 errors, 0 warnings, 0 informations
WARNING: there is a new pyright version available (v1.1.411 -> v1.1.414).
Please install the new version or set PYRIGHT_PYTHON_FORCE_VERSION to `latest`
validation OK
.agents/reports/127_sync_incremental_folder_summaries/127_sync_incremental_folder_summaries__02_folder_summaries_affected_mode.a1.err
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Everything is green. The unit run shows all dots through [100%] with exit 0.
**Task 02 complete — report**
- **Implemented** in `app/rag/folder_summaries.py`:
- `affected_folder_keys(changed)` pure helper (next to `folder_of`/`group_by_folder`) — per changed doc: source-root key + `folder_of` prefix walk; fragment paths fold in naturally; empty input → empty set
- `generate_folder_summaries(..., changed_docs=None, ...)` keyword-only kwarg: `None` = byte-identical full regen (CLI stays on it, verified unmodified at `scripts/import_docs.py:465`); given = `sorted(candidates ∩ affected_folder_keys)`; manual skip, fail-soft, `on_progress` (total = affected count), and the prune pass are untouched code; docstrings (module + function + progress) updated
- **Tests** (`tests/unit/test_folder_summaries.py`, +380 lines): helper (root/nested/multi-source/fragment/empty) + restricted mode over a 3-source catalogue — only-affected upserts (call log + fresh rows), unaffected rows byte-identical text **AND** `updated_at`, manual affected row skipped, fail-soft keeps previous row, gap-in-affected generated / gap-unaffected left to probe, vanished affected folder pruned-not-generated, hook total = affected count, `changed_docs=None` full-regen stats shape, `changed_docs=[]` no-gen but prune still runs
- **Results:** `uv run pytest --cov=app --cov-report=term-missing` → **3019 passed**, exit 0; `app/` coverage **99%** (>90%), `folder_summaries.py` **100%**; `uv run pytest tests/unit -q` → exit 0, all green; `uv run ruff check .` → passed; `uv run pyright` → 0 errors
- **Docs:** no doc impact (README sync description remains accurate; no new env/API/commands)
- **Decisions:** intersection with `candidates` (per task ASSUMPTION) — vanished affected folders are the prune pass's job; no caller combines `changed_docs` + `only_missing` (documented in the docstring)
- **Next pending task:** `03_sync_wiring.md` (sync's changed-KB branch passes `summary.changed_paths`)
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=============================== warnings summary ===============================
.venv/lib/python3.13/site-packages/fastapi/testclient.py:1
/var/home/ducoterra/Projects/Personal/brain_of_reese/.venv/lib/python3.13/site-packages/fastapi/testclient.py:1: StarletteDeprecationWarning: Using `httpx` with `starlette.testclient` is deprecated; install `httpx2` instead.
from starlette.testclient import TestClient as TestClient # noqa
-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
================================ tests coverage ================================
_______________ coverage: platform linux, python 3.13.13-final-0 _______________
Name Stmts Miss Cover
--------------------------------------------------
app/__init__.py 1 0 100%
app/api/__init__.py 0 0 100%
app/api/auth.py 52 0 100%
app/api/chat.py 262 1 99%
app/api/chat_images.py 50 0 100%
app/api/chats.py 110 0 100%
app/api/config.py 13 0 100%
app/api/doc_drafts.py 99 0 100%
app/api/docs.py 179 1 99%
app/api/git_sources.py 241 0 100%
app/api/health.py 10 0 100%
app/api/steering.py 42 0 100%
app/api/suggestions.py 33 0 100%
app/api/sync.py 139 0 100%
app/api/tokens.py 40 0 100%
app/api/ui_settings.py 55 0 100%
app/config.py 256 0 100%
app/core/__init__.py 0 0 100%
app/core/auth.py 45 0 100%
app/core/caching.py 124 0 100%
app/core/debugging.py 29 2 93%
app/core/docs_push.py 39 0 100%
app/core/errors.py 5 0 100%
app/core/logging.py 13 0 100%
app/core/rate_limit.py 44 0 100%
app/core/security_headers.py 20 0 100%
app/core/theming.py 38 0 100%
app/core/tokens.py 44 0 100%
app/db.py 22 0 100%
app/main.py 68 0 100%
app/models.py 132 0 100%
app/rag/__init__.py 0 0 100%
app/rag/agent.py 374 1 99%
app/rag/archive_upload.py 134 0 100%
app/rag/chunker.py 220 4 98%
app/rag/doc_dates.py 18 0 100%
app/rag/folder_summaries.py 134 0 100%
app/rag/git_sources.py 38 0 100%
app/rag/importer.py 571 9 98%
app/rag/llm.py 244 1 99%
app/rag/md_images.py 63 0 100%
app/rag/overview.py 71 0 100%
app/rag/pdf.py 81 0 100%
app/rag/prompts.py 144 0 100%
app/rag/retriever.py 248 3 99%
app/rag/scaffolding.py 55 0 100%
app/rag/source_removal.py 41 0 100%
app/rag/sources_meta.py 16 0 100%
app/rag/suggestions.py 27 0 100%
app/rag/summarizer.py 49 0 100%
app/schemas.py 400 0 100%
--------------------------------------------------
TOTAL 5133 22 99%
coverage gate: app/ 99% (>90%) OK
All checks passed!
0 errors, 0 warnings, 0 informations
WARNING: there is a new pyright version available (v1.1.411 -> v1.1.414).
Please install the new version or set PYRIGHT_PYTHON_FORCE_VERSION to `latest`
validation OK
.agents/reports/127_sync_incremental_folder_summaries/127_sync_incremental_folder_summaries__02_folder_summaries_affected_mode.a2.err
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.agents/reports/127_sync_incremental_folder_summaries/127_sync_incremental_folder_summaries__02_folder_summaries_affected_mode.a2.md
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All gates are green. The previous rejection was an infrastructural one (the child run ended without emitting its final report) — no test failures existed; the working tree already contained the completed task. I re-verified everything end-to-end this run: full suite with coverage, the target unit files, and lint + types.
**Task 02 complete — report**
- **Implemented** in `app/rag/folder_summaries.py` (unchanged from prior run, verified intact):
- `affected_folder_keys(changed)` pure helper — per changed doc: source-root key `(source, "")` + `folder_of` prefix walk (same concept as `group_by_folder` pass 1); fragment paths (`x.pdf#page=…`) fold into parent chain; empty input → empty set
- `generate_folder_summaries(..., changed_docs=None, ...)` keyword-only kwarg — `None` = byte-identical full regen (CLI verified unmodified at `scripts/import_docs.py:465`); given = `sorted(candidates ∩ affected_folder_keys(changed_docs))`; manual skip / fail-soft / `on_progress` (total = affected count) / prune pass untouched; module + function docstrings updated
- **Tests** (`tests/unit/test_folder_summaries.py`, 14 new): helper (root/nested/multi-source/fragment/empty) + restricted mode over a 3-source catalogue — only-affected upserts, unaffected rows byte-identical text **AND** `updated_at`, manual affected row skipped, fail-soft keeps previous row, gap-in-affected generated / gap-unaffected left to probe, vanished affected folder pruned-not-generated, hook total = affected count, `changed_docs=None` full-regen stats shape, `changed_docs=[]` no-gen but prune still runs
- **Results (this run):** `uv run pytest --cov=app --cov-report=term-missing` → **3019 passed, exit 0**; `app/` TOTAL coverage **99%** (>90%), `folder_summaries.py` **100%**; `uv run pytest tests/unit/test_folder_summaries.py tests/unit/test_importer.py -q` → exit 0; `uv run ruff check .` → all passed; `uv run pyright` → 0 errors, 0 warnings
- **Docs:** no doc impact (README sync section stays accurate; no new env/API/commands)
- **Decisions:** intersection with `candidates` per task ASSUMPTION — vanished affected folders are the prune pass's job; `changed_docs` + `only_missing` documented as never combined by any caller
- **Next pending task:** `03_sync_wiring.md` — the sync's changed-KB branch passes `summary.changed_paths`; docstrings + logging
.agents/reports/127_sync_incremental_folder_summaries/127_sync_incremental_folder_summaries__02_folder_summaries_affected_mode.a2.validate
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=============================== warnings summary ===============================
.venv/lib/python3.13/site-packages/fastapi/testclient.py:1
/var/home/ducoterra/Projects/Personal/brain_of_reese/.venv/lib/python3.13/site-packages/fastapi/testclient.py:1: StarletteDeprecationWarning: Using `httpx` with `starlette.testclient` is deprecated; install `httpx2` instead.
from starlette.testclient import TestClient as TestClient # noqa
-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
================================ tests coverage ================================
_______________ coverage: platform linux, python 3.13.13-final-0 _______________
Name Stmts Miss Cover
--------------------------------------------------
app/__init__.py 1 0 100%
app/api/__init__.py 0 0 100%
app/api/auth.py 52 0 100%
app/api/chat.py 262 1 99%
app/api/chat_images.py 50 0 100%
app/api/chats.py 110 0 100%
app/api/config.py 13 0 100%
app/api/doc_drafts.py 99 0 100%
app/api/docs.py 179 1 99%
app/api/git_sources.py 241 0 100%
app/api/health.py 10 0 100%
app/api/steering.py 42 0 100%
app/api/suggestions.py 33 0 100%
app/api/sync.py 139 0 100%
app/api/tokens.py 40 0 100%
app/api/ui_settings.py 55 0 100%
app/config.py 256 0 100%
app/core/__init__.py 0 0 100%
app/core/auth.py 45 0 100%
app/core/caching.py 124 0 100%
app/core/debugging.py 29 2 93%
app/core/docs_push.py 39 0 100%
app/core/errors.py 5 0 100%
app/core/logging.py 13 0 100%
app/core/rate_limit.py 44 0 100%
app/core/security_headers.py 20 0 100%
app/core/theming.py 38 0 100%
app/core/tokens.py 44 0 100%
app/db.py 22 0 100%
app/main.py 68 0 100%
app/models.py 132 0 100%
app/rag/__init__.py 0 0 100%
app/rag/agent.py 374 1 99%
app/rag/archive_upload.py 134 0 100%
app/rag/chunker.py 220 4 98%
app/rag/doc_dates.py 18 0 100%
app/rag/folder_summaries.py 134 0 100%
app/rag/git_sources.py 38 0 100%
app/rag/importer.py 571 9 98%
app/rag/llm.py 244 1 99%
app/rag/md_images.py 63 0 100%
app/rag/overview.py 71 0 100%
app/rag/pdf.py 81 0 100%
app/rag/prompts.py 144 0 100%
app/rag/retriever.py 248 3 99%
app/rag/scaffolding.py 55 0 100%
app/rag/source_removal.py 41 0 100%
app/rag/sources_meta.py 16 0 100%
app/rag/suggestions.py 27 0 100%
app/rag/summarizer.py 49 0 100%
app/schemas.py 400 0 100%
--------------------------------------------------
TOTAL 5133 22 99%
coverage gate: app/ 99% (>90%) OK
All checks passed!
0 errors, 0 warnings, 0 informations
WARNING: there is a new pyright version available (v1.1.411 -> v1.1.414).
Please install the new version or set PYRIGHT_PYTHON_FORCE_VERSION to `latest`
validation OK
.agents/reports/127_sync_incremental_folder_summaries/127_sync_incremental_folder_summaries__03_sync_wiring.a1.err
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Everything is verified green. The previous run completed all of task 03's work but its validation was interrupted by a KeyboardInterrupt; I re-verified every gate from scratch and confirmed the implementation matches the task spec exactly.
**Task 03 — Sync wiring: complete (verified)**
- `app/api/sync.py`: changed-KB branch calls `generate_folder_summaries(fs_db, llm, changed_docs=summary.changed_paths, on_progress=_summary_hook)`; else-arm (gap probe, `only_missing=True`) byte-identical; log line now `sync: folder_summaries changed=%d stats=%s`
- Docstrings updated to the incremental contract: module docstring step-5 + phase-machine paragraph (incl. stale "at least 2 docs" → "at least 1 doc" fix) and `SyncStatus` `summaries_done/total` note (total = affected count on changed KB, missing count on gap-fill)
- `detail` dict (12 keys) and `GET /api/sync/status` shape unchanged — asserted in tests
- Fakes extended to accept/record `changed_docs=`: `tests/integration/test_sync_api.py` (`FakeFolderSummaries`, `_GatedFolderSummaries`, `_HookThenFail`) + `tests/unit/test_sync_button.py`
- 3 new tests in `tests/integration/test_sync_api.py`: change-set wiring + `changed=N` log + detail shape; unchanged-walk gap probe passes `only_missing=True` with `changed_docs=None`; mid-span status `summaries_total == len(affected_folder_keys(...))` — all 3 pass individually (3 passed, 22 deselected)
**Results:**
- `uv run pytest tests/unit -q` → 2326 passed
- `uv run pytest --cov=app --cov-report=term-missing` → **3022 passed**, app/ **99%** (sync.py 100%, folder_summaries.py 100%, importer.py 98%) — gate >90% ✅
- `uv run ruff check .` → All checks passed; `uv run pyright` → 0 errors, 0 warnings
**Docs:** no doc impact (no setup/commands/config/env/API changes; README never described the regeneration mode, AGENTS.md untouched).
**Note:** prune-only syncs still take the gap-probe branch (pre-existing `added+updated>0` gate untouched, per task scope). `NOTES.md` (owner's untracked note) left in place.
**Next pending task:** `04_e2e_incremental_sync.md` (dedicated Playwright E2E in isolation)
.agents/reports/127_sync_incremental_folder_summaries/127_sync_incremental_folder_summaries__03_sync_wiring.a1.validate
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=============================== warnings summary ===============================
.venv/lib/python3.13/site-packages/fastapi/testclient.py:1
/var/home/ducoterra/Projects/Personal/brain_of_reese/.venv/lib/python3.13/site-packages/fastapi/testclient.py:1: StarletteDeprecationWarning: Using `httpx` with `starlette.testclient` is deprecated; install `httpx2` instead.
from starlette.testclient import TestClient as TestClient # noqa
-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
================================ tests coverage ================================
_______________ coverage: platform linux, python 3.13.13-final-0 _______________
Name Stmts Miss Cover
--------------------------------------------------
app/__init__.py 1 0 100%
app/api/__init__.py 0 0 100%
app/api/auth.py 52 0 100%
app/api/chat.py 262 1 99%
app/api/chat_images.py 50 0 100%
app/api/chats.py 110 0 100%
app/api/config.py 13 0 100%
app/api/doc_drafts.py 99 0 100%
app/api/docs.py 179 1 99%
app/api/git_sources.py 241 0 100%
app/api/health.py 10 0 100%
app/api/steering.py 42 0 100%
app/api/suggestions.py 33 0 100%
app/api/sync.py 139 0 100%
app/api/tokens.py 40 0 100%
app/api/ui_settings.py 55 0 100%
app/config.py 256 0 100%
app/core/__init__.py 0 0 100%
app/core/auth.py 45 0 100%
app/core/caching.py 124 0 100%
app/core/debugging.py 29 2 93%
app/core/docs_push.py 39 0 100%
app/core/errors.py 5 0 100%
app/core/logging.py 13 0 100%
app/core/rate_limit.py 44 0 100%
app/core/security_headers.py 20 0 100%
app/core/theming.py 38 0 100%
app/core/tokens.py 44 0 100%
app/db.py 22 0 100%
app/main.py 68 0 100%
app/models.py 132 0 100%
app/rag/__init__.py 0 0 100%
app/rag/agent.py 374 1 99%
app/rag/archive_upload.py 134 0 100%
app/rag/chunker.py 220 4 98%
app/rag/doc_dates.py 18 0 100%
app/rag/folder_summaries.py 134 0 100%
app/rag/git_sources.py 38 0 100%
app/rag/importer.py 571 9 98%
app/rag/llm.py 244 1 99%
app/rag/md_images.py 63 0 100%
app/rag/overview.py 71 0 100%
app/rag/pdf.py 81 0 100%
app/rag/prompts.py 144 0 100%
app/rag/retriever.py 248 3 99%
app/rag/scaffolding.py 55 0 100%
app/rag/source_removal.py 41 0 100%
app/rag/sources_meta.py 16 0 100%
app/rag/suggestions.py 27 0 100%
app/rag/summarizer.py 49 0 100%
app/schemas.py 400 0 100%
--------------------------------------------------
TOTAL 5133 22 99%
coverage gate: app/ 99% (>90%) OK
All checks passed!
0 errors, 0 warnings, 0 informations
WARNING: there is a new pyright version available (v1.1.411 -> v1.1.414).
Please install the new version or set PYRIGHT_PYTHON_FORCE_VERSION to `latest`
validation OK
.agents/reports/127_sync_incremental_folder_summaries/127_sync_incremental_folder_summaries__04_e2e_incremental_sync.a1.err
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.agents/reports/127_sync_incremental_folder_summaries/127_sync_incremental_folder_summaries__04_e2e_incremental_sync.a1.md
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All green. Final report:
**Implemented**
- New `tests/e2e/test_incremental_folder_summaries.py` — dedicated mock-only Playwright suite (phase 127 task 04), house pattern from `test_sync_summary_visibility.py`: module app on port 8147 (env-overridable), host temp-dir `kind=local` source `incsum/` (4 folders × 2 docs + 1 root doc = 9 files, 5 candidates), autouse truncate + settle-wait cleanup, stale-terminal freshness gate in `_run_sync`.
- 3 tests: (1) first full sync → exactly 5 canned rows, terminal keeps 5/5; (2) one `alpha/` file changed → only `alpha` + source root re-stamped (strictly newer `updated_at`), `bravo`/`charlie`/`delta` byte-identical (text AND `updated_at`), terminal keeps `summaries_done == summaries_total == 2`; (3) `bravo/` vanishes → its row pruned by the prune pass, `charlie` + root re-stamped, `alpha`/`delta` byte-identical, terminal 2/2.
**Gates (all 100% green)**
- `uv run pytest tests/e2e/test_incremental_folder_summaries.py -v --no-cov` → 3 passed, in isolation (run twice; DB up)
- `uv run pytest --cov=app --cov-report=term-missing` → 3022 passed; `app/` coverage 99% (>90%)
- `uv run ruff check .` → all checks passed; `uv run pyright` → 0 errors
**Docs**
- README.md: added step 4 to the "Sync from the UI" pipeline (folder summaries: incremental on changed KB, gap-fill on unchanged) — it predated folder summaries entirely (stale since phase 94). AGENTS.md: no impact.
**Decisions**
- "bravo's last doc" read as *the docs whose deletion makes the folder vanish* (0 docs → not a candidate); both `bravo/` files deleted, since a 1-doc folder is still a candidate and would not be pruned. All other assertions match the task verbatim.
**Next pending task:** none — task 04 is the last task of phase 127.
.agents/reports/127_sync_incremental_folder_summaries/127_sync_incremental_folder_summaries__04_e2e_incremental_sync.a1.validate
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=============================== warnings summary ===============================
.venv/lib/python3.13/site-packages/fastapi/testclient.py:1
/var/home/ducoterra/Projects/Personal/brain_of_reese/.venv/lib/python3.13/site-packages/fastapi/testclient.py:1: StarletteDeprecationWarning: Using `httpx` with `starlette.testclient` is deprecated; install `httpx2` instead.
from starlette.testclient import TestClient as TestClient # noqa
-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
================================ tests coverage ================================
_______________ coverage: platform linux, python 3.13.13-final-0 _______________
Name Stmts Miss Cover
--------------------------------------------------
app/__init__.py 1 0 100%
app/api/__init__.py 0 0 100%
app/api/auth.py 52 0 100%
app/api/chat.py 262 1 99%
app/api/chat_images.py 50 0 100%
app/api/chats.py 110 0 100%
app/api/config.py 13 0 100%
app/api/doc_drafts.py 99 0 100%
app/api/docs.py 179 1 99%
app/api/git_sources.py 241 0 100%
app/api/health.py 10 0 100%
app/api/steering.py 42 0 100%
app/api/suggestions.py 33 0 100%
app/api/sync.py 139 0 100%
app/api/tokens.py 40 0 100%
app/api/ui_settings.py 55 0 100%
app/config.py 256 0 100%
app/core/__init__.py 0 0 100%
app/core/auth.py 45 0 100%
app/core/caching.py 124 0 100%
app/core/debugging.py 29 2 93%
app/core/docs_push.py 39 0 100%
app/core/errors.py 5 0 100%
app/core/logging.py 13 0 100%
app/core/rate_limit.py 44 0 100%
app/core/security_headers.py 20 0 100%
app/core/theming.py 38 0 100%
app/core/tokens.py 44 0 100%
app/db.py 22 0 100%
app/main.py 68 0 100%
app/models.py 132 0 100%
app/rag/__init__.py 0 0 100%
app/rag/agent.py 374 1 99%
app/rag/archive_upload.py 134 0 100%
app/rag/chunker.py 220 4 98%
app/rag/doc_dates.py 18 0 100%
app/rag/folder_summaries.py 134 0 100%
app/rag/git_sources.py 38 0 100%
app/rag/importer.py 571 9 98%
app/rag/llm.py 244 1 99%
app/rag/md_images.py 63 0 100%
app/rag/overview.py 71 0 100%
app/rag/pdf.py 81 0 100%
app/rag/prompts.py 144 0 100%
app/rag/retriever.py 248 3 99%
app/rag/scaffolding.py 55 0 100%
app/rag/source_removal.py 41 0 100%
app/rag/sources_meta.py 16 0 100%
app/rag/suggestions.py 27 0 100%
app/rag/summarizer.py 49 0 100%
app/schemas.py 400 0 100%
--------------------------------------------------
TOTAL 5133 22 99%
coverage gate: app/ 99% (>90%) OK
All checks passed!
0 errors, 0 warnings, 0 informations
WARNING: there is a new pyright version available (v1.1.411 -> v1.1.414).
Please install the new version or set PYRIGHT_PYTHON_FORCE_VERSION to `latest`
validation OK
.agents/reports/127_sync_incremental_folder_summaries/127_sync_incremental_folder_summaries__04_e2e_incremental_sync.a2.err
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.agents/reports/127_sync_incremental_folder_summaries/127_sync_incremental_folder_summaries__04_e2e_incremental_sync.a2.md
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All checks are green and consistent. The documentation is accurate:
- **README.md** — the step-4 addition from the prior run is intact and matches the implemented behavior (incremental on changed KB via the changed set's folder chains, gap-fill on unchanged walks). The "Updating the documents" CLI section makes no regeneration-scope claims (CLI keeps full regen — consistent).
- **AGENTS.md** — no references to the sync pipeline internals; operating rules, test gates, and conventions all still accurate. No changes needed.
All gates re-verified from scratch this run (the prior a2 attempt was an infrastructural interruption — it died mid-run without a report, leaving no port or DB residue):
**What was verified/fixed this run**
- Confirmed working tree intact from the successful a1 run: `tests/e2e/test_incremental_folder_summaries.py` (3 tests: first-full-sync 5 canned rows @ terminal 5/5; one `alpha/` file → only `alpha`+root re-stamped, siblings byte-identical text AND `updated_at`, terminal 2/2; `bravo/` vanishes → row pruned, `charlie`+root re-stamped, terminal 2/2) plus tasks 01–03 code/tests.
- No code changes required — re-ran every gate fresh; found no defects, no leftovers (ports clean, DB truncated).
- Doc consistency check: README step-4 accurate; AGENTS.md untouched.
**Results (this run)**
- `uv run pytest --cov=app --cov-report=term-missing` → 3022 passed; `app/` coverage 99% (>90%)
- `uv run pytest tests/e2e/test_incremental_folder_summaries.py -v --no-cov` → 3 passed in isolation (run twice)
- `uv run ruff check .` → all passed; `uv run pyright` → 0 errors
**Notable decision** (unchanged from a1): "bravo's last doc" = the docs whose deletion makes the folder vanish (both deleted; a 1-doc folder is still a candidate and wouldn't prune).
**Next pending task:** none — task 04 is the last task of phase 127.
.agents/reports/127_sync_incremental_folder_summaries/127_sync_incremental_folder_summaries__04_e2e_incremental_sync.a2.validate
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=============================== warnings summary ===============================
.venv/lib/python3.13/site-packages/fastapi/testclient.py:1
/var/home/ducoterra/Projects/Personal/brain_of_reese/.venv/lib/python3.13/site-packages/fastapi/testclient.py:1: StarletteDeprecationWarning: Using `httpx` with `starlette.testclient` is deprecated; install `httpx2` instead.
from starlette.testclient import TestClient as TestClient # noqa
-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
================================ tests coverage ================================
_______________ coverage: platform linux, python 3.13.13-final-0 _______________
Name Stmts Miss Cover
--------------------------------------------------
app/__init__.py 1 0 100%
app/api/__init__.py 0 0 100%
app/api/auth.py 52 0 100%
app/api/chat.py 262 1 99%
app/api/chat_images.py 50 0 100%
app/api/chats.py 110 0 100%
app/api/config.py 13 0 100%
app/api/doc_drafts.py 99 0 100%
app/api/docs.py 179 1 99%
app/api/git_sources.py 241 0 100%
app/api/health.py 10 0 100%
app/api/steering.py 42 0 100%
app/api/suggestions.py 33 0 100%
app/api/sync.py 139 0 100%
app/api/tokens.py 40 0 100%
app/api/ui_settings.py 55 0 100%
app/config.py 256 0 100%
app/core/__init__.py 0 0 100%
app/core/auth.py 45 0 100%
app/core/caching.py 124 0 100%
app/core/debugging.py 29 2 93%
app/core/docs_push.py 39 0 100%
app/core/errors.py 5 0 100%
app/core/logging.py 13 0 100%
app/core/rate_limit.py 44 0 100%
app/core/security_headers.py 20 0 100%
app/core/theming.py 38 0 100%
app/core/tokens.py 44 0 100%
app/db.py 22 0 100%
app/main.py 68 0 100%
app/models.py 132 0 100%
app/rag/__init__.py 0 0 100%
app/rag/agent.py 374 1 99%
app/rag/archive_upload.py 134 0 100%
app/rag/chunker.py 220 4 98%
app/rag/doc_dates.py 18 0 100%
app/rag/folder_summaries.py 134 0 100%
app/rag/git_sources.py 38 0 100%
app/rag/importer.py 571 9 98%
app/rag/llm.py 244 1 99%
app/rag/md_images.py 63 0 100%
app/rag/overview.py 71 0 100%
app/rag/pdf.py 81 0 100%
app/rag/prompts.py 144 0 100%
app/rag/retriever.py 248 3 99%
app/rag/scaffolding.py 55 0 100%
app/rag/source_removal.py 41 0 100%
app/rag/sources_meta.py 16 0 100%
app/rag/suggestions.py 27 0 100%
app/rag/summarizer.py 49 0 100%
app/schemas.py 400 0 100%
--------------------------------------------------
TOTAL 5133 22 99%
coverage gate: app/ 99% (>90%) OK
All checks passed!
0 errors, 0 warnings, 0 informations
WARNING: there is a new pyright version available (v1.1.411 -> v1.1.414).
Please install the new version or set PYRIGHT_PYTHON_FORCE_VERSION to `latest`
validation OK